RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FDXRP22570 491 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 FGFR3P22607 806 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 PEX2P28328 305 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 DPP6P42658 865 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CEACAM7Q14002 265 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 PTK2BQ14289 1009 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CTXN3Q4LDR2 81 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 SFT2D3Q587I9 215 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 RAP1GAP2Q684P5 730 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 FAM45BPQ6NSW5 357 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 ZFP1Q6P2D0 407 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 ISCA2Q86U28 154 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CUZD1Q86UP6 607 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 EFCAB3Q8N7B9 438 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 ATAD1Q8NBU5 361 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 HMGCLL1Q8TB92 370 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 FAM45AQ8TCE6 357 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 FBXO32Q969P5 355 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 HDAC10Q969S8 669 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 SGF29Q96ES7 293 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 ZNF599Q96NL3 588 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CDRT15Q96T59 188 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 PPP1R12CQ9BZL4 782 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 UNKQ9C0B0 810 aaKnown RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 POLR1EQ9GZS1 481 aaKnown RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 EBF3Q9H4W6 596 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 SUDS3Q9H7L9 328 aaPredicted RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 WDR41Q9HAD4 459 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TRPC7Q9HCX4 862 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TNFRSF12AQ9NP84 129 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 NMRK2Q9NPI5 230 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 MARCH4Q9P2E8 410 aaPredicted RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 PDP2Q9P2J9 529 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 SARDHQ9UL12 918 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 ACOT8O14734 319 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 FGF1P05230 155 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 HLA-DPA1P20036 260 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 C1QTNF8P60827 252 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TIAL1Q01085 375 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDPN-212ENST00000621990 ITKQ08881 620 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 SMARCB1Q12824 385 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TAF10Q12962 218 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 RASIP1Q5U651 963 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 LPCAT4Q643R3 524 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 NADSYN1Q6IA69 706 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 RNF180Q86T96 592 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 AFAP1L2Q8N4X5 818 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 SLC43A3Q8NBI5 491 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 BTBD9Q96Q07 612 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 SPATS2LQ9NUQ6 558 aaKnown RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 POLR3BQ9NW08 1133 aaPredicted RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 TMEM161AQ9NX61 479 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 PRG3Q9Y2Y8 225 aaPredicted RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 MUSKO15146 869 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 BCAS2O75934 225 aaPredicted RBP9.46□□□□□ -0.89
PDPN-212ENST00000621990 UQCRBP14927 111 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 PSMA3P25788 255 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 KPNA1P52294 538 aaPredicted RBP9.46□□□□□ -0.89
PDPN-212ENST00000621990 GPR17Q13304 367 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 GRM2Q14416 872 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 SQLEQ14534 574 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 NXNQ6DKJ4 435 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 CYHR1Q6ZMK1 362 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 PTAR1Q7Z6K3 402 aaPredicted RBP9.46□□□□□ -0.89
PDPN-212ENST00000621990 PQLC1Q8N2U9 271 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 GPR152Q8TDT2 470 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 DLG3Q92796 817 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 MYEOVQ96EZ4 313 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 TRIB3Q96RU7 358 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 CRISPLD1Q9H336 500 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 ELAC1Q9H777 363 aaKnown RBP9.46□□□□□ -0.89
PDPN-212ENST00000621990 GTSE1Q9NYZ3 720 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 BCAP29Q9UHQ4 241 aa9.46□□□□□ -0.89
PDPN-212ENST00000621990 GBF1Q92538 1859 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 TTC24A2A3L6 582 aaPredicted RBP9.46□□□□□ -0.9
PDPN-212ENST00000621990 MTMR11A4FU01 709 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 UBFD1O14562 309 aaKnown RBP9.46□□□□□ -0.9
PDPN-212ENST00000621990 RNASEH1O60930 286 aaKnown RBP9.46□□□□□ -0.9
PDPN-212ENST00000621990 XRCC1P18887 633 aaPredicted RBP9.46□□□□□ -0.9
PDPN-212ENST00000621990 ME2P23368 584 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 OR1E1P30953 314 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 KCNC1P48547 511 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 ATP4BP51164 291 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 PRAMEP78395 509 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 FLOT2Q14254 428 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 TYSND1Q2T9J0 566 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 C10orf120Q5SQS8 335 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 ZNF678Q5SXM1 525 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 ZNF549Q6P9A3 640 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 MIB1Q86YT6 1006 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 PHC3Q8NDX5 983 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 BRSK1Q8TDC3 778 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 MARK4Q96L34 752 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 RPRD1AQ96P16 312 aaPredicted RBP9.46□□□□□ -0.9
PDPN-212ENST00000621990 TRAPPC9Q96Q05 1148 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 ZIC5Q96T25 663 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 SEMA3CQ99985 751 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 GPR62Q9BZJ7 368 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 CYP4F12Q9HCS2 524 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms