RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 MAGEA3P43357 314 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 GRAMD4Q6IC98 578 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 FBXL22Q6P050 247 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 LPCAT2Q7L5N7 544 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 GIPC3Q8TF64 312 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 MRPS26Q9BYN8 205 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 BPIFA1Q9NP55 256 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 IGSF9Q9P2J2 1179 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 COPG2Q9UBF2 871 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 CKMP06732 381 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 PLD1Q13393 1074 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 PCLAFQ15004 111 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 MAPRE1Q15691 268 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 RARS2Q5T160 578 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 CEP97Q8IW35 865 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 PIWIL2Q8TC59 973 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 ADAM28Q9UKQ2 775 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 CROCCQ5TZA2 2017 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 TRIM43BA6NCK2 446 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 NCF1BA6NI72 391 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 NCF1CA8MVU1 366 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 KCNU1A8MYU2 1149 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 CCNT2O60583 730 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 MAFKO60675 156 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 ZNF623O75123 536 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 NCF1P14598 390 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 SELPP16109 830 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 SLC11A1P49279 550 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 CDH15P55291 814 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 GALNT2Q10471 571 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 NFE2Q16621 373 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 ARHGAP12Q8IWW6 846 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 CPNE9Q8IYJ1 553 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 FBXW8Q8N3Y1 598 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 SEMA3CQ99985 751 aa14.55□□□□□ -0.08
SHROOM1-208ENST00000617339 ZNF235Q14590 738 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 VEPH1Q14D04 833 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 POLD3Q15054 466 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 ADGRG6Q86SQ4 1221 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 FAM156AQ8NDB6 213 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 OR52K2Q8NGK3 314 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 LZICQ8WZA0 190 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 HDAC10Q969S8 669 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 NTAN1Q96AB6 310 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 RBBP8Q99708 897 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 THAP1Q9NVV9 213 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 RCOR3Q9P2K3 495 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 XPR1Q9UBH6 696 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 DCDC2Q9UHG0 476 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 ZSWIM8A7E2V4 1837 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 CABYRO75952 493 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 KLHL2O95198 593 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 GJB5O95377 273 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 FGF3P11487 239 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 ENO3P13929 434 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 AOC1P19801 751 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 GABRB3P28472 473 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 FLOT2Q14254 428 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 SPANXN3Q5MJ09 141 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 PATL1Q86TB9 770 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 PPHLN1Q8NEY8 458 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 JADE3Q92613 823 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 CPNE1Q99829 537 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 FAM96AQ9H5X1 160 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 PNPLA8Q9NP80 782 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 C9JVG2 144 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 NBNO60934 754 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 PIGNO95427 931 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 RPL34P49207 117 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 APLP1P51693 650 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 CDH13P55290 713 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 TAS2R39P59534 338 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 NIPAL4Q0D2K0 466 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 SEMA3BQ13214 749 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 LAYNQ6UX15 382 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 LIMS2Q7Z4I7 341 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 HDAC11Q96DB2 347 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 ARMC7Q9H6L4 198 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 DSEQ9UL01 958 aa14.54□□□□□ -0.08
SHROOM1-208ENST00000617339 FAM95CA0A1B0GW59 222 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MLLT6P55198 1093 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 SLC9B1Q4ZJI4 515 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 PPM1LQ5SGD2 360 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 FAM91A1Q658Y4 838 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 C4orf22Q6V702 233 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MRPL10Q7Z7H8 261 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 PIM3Q86V86 326 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 MON1AQ86VX9 555 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 DCBLD1Q8N8Z6 715 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ESAMQ96AP7 390 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ZFRQ96KR1 1074 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 TBATAQ96M53 351 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 CDRT15Q96T59 188 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 SLC9A7Q96T83 725 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 GATA5Q9BWX5 397 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 ACE2Q9BYF1 805 aaPredicted RBP14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 IL22Q9GZX6 179 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 C1orf21Q9H246 121 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 TIMMDC1Q9NPL8 285 aa14.53□□□□□ -0.08
SHROOM1-208ENST00000617339 RRN3Q9NYV6 651 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms