RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 PPP1R3AQ16821 1122 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 LSM12Q3MHD2 195 aaKnown RBP14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CLLU1OSQ5K130 101 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 TEDDM1Q5T9Z0 273 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 HECTD2Q5U5R9 776 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PARP8Q8N3A8 854 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 KYQ8NBH2 561 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 EML4Q9HC35 981 aaKnown RBP14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 ZDHHC2Q9UIJ5 367 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 ARFGEF1Q9Y6D6 1849 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 COL24A1Q17RW2 1714 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CCDC162PA2VCL2 907 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 MBLAC1A4D2B0 266 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 VPS26AO75436 327 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 COX4I1P13073 169 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 HGFP14210 728 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SLC2A4P14672 509 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 RAD51Q06609 339 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 MS4A13Q5J8X5 152 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 BNC2Q6ZN30 1099 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CPNE9Q8IYJ1 553 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CNDP1Q96KN2 507 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 HGH1Q9BTY7 390 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 RHOJQ9H4E5 214 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 MTG2Q9H4K7 406 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 WDR6Q9NNW5 1121 aaKnown RBP14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 LMCD1Q9NZU5 365 aa14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 MARCH4Q9P2E8 410 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF11A-206ENST00000617039 MATN3O15232 486 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PIK3R6Q5UE93 754 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CEP70Q8NHQ1 597 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SHKBP1Q8TBC3 707 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SNX19Q92543 992 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SH3KBP1Q96B97 665 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 BTN2A3PQ96KV6 586 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 EFCAB1Q9HAE3 211 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PPP6CO00743 305 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 OR1I1O60431 355 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CXCL14O95715 111 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PYGLP06737 847 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 IDH3AP50213 366 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 IL27RAQ6UWB1 636 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 RTL3Q8N8U3 475 aaKnown RBP14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 OR10Q1Q8NGQ4 319 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SLC22A17Q8WUG5 538 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 VPS50Q96JG6 964 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 TAS2R13Q9NYV9 303 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SEPT3Q9UH03 358 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 RAI2Q9Y5P3 530 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 ESRRBO95718 433 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PRKAA1Q13131 559 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 KRT33BQ14525 404 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 STARD3Q14849 445 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PRKD1Q15139 912 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 VPS26BQ4G0F5 336 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 MAP3K21Q5TCX8 1036 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CMTM8Q8IZV2 173 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SIDT2Q8NBJ9 832 aaKnown RBP14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 VRTNQ9H8Y1 702 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 KLQ9UEF7 1012 aa14.87□□□□□ -0.03
TNFRSF11A-206ENST00000617039 OR2AG2A6NM03 316 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 ZNF839A8K0R7 811 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 H7C4K7 107 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 HDAC3O15379 428 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SYNCRIPO60506 623 aaKnown RBP14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CRTAMO95727 393 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 GNA12Q03113 381 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PPIDQ08752 370 aaKnown RBP14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 LRRC74AQ0VAA2 488 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 TRIM60Q495X7 471 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PAQR3Q6TCH7 311 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 RD3Q7Z3Z2 195 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SCD5Q86SK9 330 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 ARHGAP18Q8N392 663 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 OR4L1Q8NH43 312 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 ATG10Q9H0Y0 220 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 ACTR8Q9H981 624 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 WDR41Q9HAD4 459 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CABIN1Q9Y6J0 2220 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 MAGEB16A2A368 324 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 H3BMM5 538 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 TBX10O75333 385 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 NTRK1P04629 796 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 GSNP06396 782 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CNPP09543 421 aaKnown RBP14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CSF2RAP15509 400 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 EEF1DP29692 281 aaKnown RBP14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 TUFMP49411 452 aaKnown RBP14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 NFYCQ13952 458 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 CCDC153Q494R4 210 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 FRMD7Q6ZUT3 714 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 LZTR1Q8N653 840 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 GDPD5Q8WTR4 605 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 UCMAQ8WVF2 138 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 SORCS1Q8WY21 1168 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 VPS33AQ96AX1 596 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 PAWRQ96IZ0 340 aaKnown RBP14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 FEM1CQ96JP0 617 aa14.86□□□□□ -0.03
TNFRSF11A-206ENST00000617039 OSGEPL1Q9H4B0 414 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms