RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ABHD2P08910 425 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.57
SLIRP-212ENST00000613856 HLA-DPA1P20036 260 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 HSD17B3P37058 310 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 NPY2RP49146 381 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 ST8SIA6P61647 398 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 CDK18Q07002 472 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 LRRC32Q14392 662 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 SPARCL1Q14515 664 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 CASP8Q14790 479 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 GRM3Q14832 879 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 FASTKD3Q14CZ7 662 aaKnown RBP11.52□□□□□ -0.57
SLIRP-212ENST00000613856 DLG2Q15700 870 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 UAP1Q16222 522 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-212ENST00000613856 BBS9Q3SYG4 887 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 CARD16Q5EG05 197 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 DGKKQ5KSL6 1271 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 ATXN7L2Q5T6C5 722 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-212ENST00000613856 DENND5AQ6IQ26 1287 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 HDXQ7Z353 690 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 RALGPS2Q86X27 583 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-212ENST00000613856 CCNJLQ8IV13 435 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 ZBED8Q8IZ13 594 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.57
SLIRP-212ENST00000613856 KDF1Q8NAX2 398 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-212ENST00000613856 OR52K1Q8NGK4 314 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 CYB5D2Q8WUJ1 264 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 UCMAQ8WVF2 138 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 GATA6Q92908 595 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 SIGLEC10Q96LC7 697 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 NSMCE3Q96MG7 304 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 HHIPQ96QV1 700 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 TUBGCP5Q96RT8 1024 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 P2RY13Q9BPV8 354 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 NAT9Q9BTE0 207 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 EDEM2Q9BV94 578 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 TM6SF2Q9BZW4 377 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 IL22Q9GZX6 179 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 EPB41L4BQ9H329 900 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 VIPAS39Q9H9C1 493 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 NINJ2Q9NZG7 142 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 SLCO3A1Q9UIG8 710 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 STARD13Q9Y3M8 1113 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 THADAQ6YHU6 1953 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 ASCC3Q8N3C0 2202 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 TTC24A2A3L6 582 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 ANTXRLA6NF34 631 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 SDR42E2A6NKP2 422 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 MAP2K7O14733 419 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 NPC1O15118 1278 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 RIPK2O43353 540 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 ATP8B1O43520 1251 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 FZD6O60353 706 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 USP12O75317 370 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 AVILO75366 819 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 SPAG6O75602 509 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 NDST3O95803 873 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 CPP00450 1065 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 AGTP01019 485 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 GSTA2P09210 222 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 NUDT17P0C025 328 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 HOXA6P31267 233 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 ELK3P41970 407 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 TNFRSF4P43489 277 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 RPL26P61254 145 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 TRAF2Q12933 501 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 OLIG2Q13516 323 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 SLC1A5Q15758 541 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 PCSK7Q16549 785 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 PLK5Q496M5 336 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 FSTL4Q6MZW2 842 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 KIAA1211LQ6NV74 962 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 DNAAF3Q8N9W5 541 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 FBXO36Q8NEA4 188 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 PYROXD1Q8WU10 500 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 PTCD2Q8WV60 388 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 IFT43Q96FT9 208 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 EBNA1BP2Q99848 306 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 FUT8Q9BYC5 575 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 CPEB1Q9BZB8 566 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 ATP13A3Q9H7F0 1226 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 MRM3Q9HC36 420 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 FBRSL1Q9HCM7 1045 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 ZNF446Q9NWS9 450 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 BFARQ9NZS9 450 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 THAP10Q9P2Z0 257 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 RPL26L1Q9UNX3 145 aaKnown RBP11.51□□□□□ -0.57
SLIRP-212ENST00000613856 PLA2G4CQ9UP65 541 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 INVSQ9Y283 1065 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 RAI2Q9Y5P3 530 aa11.51□□□□□ -0.57
SLIRP-212ENST00000613856 ADAMTS9Q9P2N4 1935 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 SCN8AQ9UQD0 1980 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 DSPP15924 2871 aaKnown RBP11.5□□□□□ -0.57
SLIRP-212ENST00000613856 A0A1W2PQ67 120 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 TBC1D3BA6NDS4 549 aa11.5□□□□□ -0.57
SLIRP-212ENST00000613856 PATE3B3GLJ2 98 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms