RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 PSTPIP1O43586 416 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 CST8O60676 142 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 NEBLO76041 1014 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 CPP00450 1065 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 PRLP01236 227 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 ITGAVP06756 1048 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 CELA2BP08218 269 aaPredicted RBP12.73□□□□□ -0.37
CSTF1-208ENST00000613138 FTH1P19P0C7X4 201 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 LHCGRP22888 699 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 CCNCP24863 283 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 PFN3P60673 137 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 PPIDQ08752 370 aaKnown RBP12.73□□□□□ -0.37
CSTF1-208ENST00000613138 AP1B1Q10567 949 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 EIF2B5Q13144 721 aaKnown RBP12.73□□□□□ -0.37
CSTF1-208ENST00000613138 CNGA3Q16281 694 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 LIPIQ6XZB0 460 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
CSTF1-208ENST00000613138 DPPA4Q7L190 304 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 KIAA1328Q86T90 577 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 IQCHQ86VS3 1027 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 SLC25A45Q8N413 288 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 CHCHD4Q8N4Q1 142 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 LRRC57Q8N9N7 239 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 NSMCE1Q8WV22 266 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 PIH1D2Q8WWB5 315 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 ALG3Q92685 438 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 HDAC11Q96DB2 347 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 MAK16Q9BXY0 300 aaKnown RBP12.73□□□□□ -0.37
CSTF1-208ENST00000613138 DNAJC28Q9NX36 388 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 DDX56Q9NY93 547 aaKnown RBP12.73□□□□□ -0.37
CSTF1-208ENST00000613138 KLK13Q9UKR3 277 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 OR1A2Q9Y585 309 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 HS3ST3A1Q9Y663 406 aa12.73□□□□□ -0.37
CSTF1-208ENST00000613138 COL5A1P20908 1838 aaPredicted RBP12.72□□□□□ -0.37
CSTF1-208ENST00000613138 KNTC1P50748 2209 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 K7ESM1 405 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 TRIM38O00635 465 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 FPGTO14772 594 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 FFAR2O15552 330 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 FLRT2O43155 660 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 LZTS3O60299 673 aaPredicted RBP12.72□□□□□ -0.37
CSTF1-208ENST00000613138 PCDHGA12O60330 932 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 DFNA5O60443 496 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 RECQL5O94762 991 aaPredicted RBP12.72□□□□□ -0.37
CSTF1-208ENST00000613138 PGLSO95336 258 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 FTCDO95954 541 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 CD86P42081 329 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 ELP6Q0PNE2 266 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 GRM3Q14832 879 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 ERAP2Q6P179 960 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 KDELC2Q7Z4H8 507 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 HSD11B1LQ7Z5J1 315 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
CSTF1-208ENST00000613138 CCDC50Q8IVM0 306 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 KATNAL2Q8IYT4 538 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 HCAR2Q8TDS4 363 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 LENG8Q96PV6 779 aaPredicted RBP12.72□□□□□ -0.37
CSTF1-208ENST00000613138 IL12RB2Q99665 862 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 IMPACTQ9P2X3 320 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 CAPN6Q9Y6Q1 641 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 SCN8AQ9UQD0 1980 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 ASPMQ8IZT6 3477 aa12.72□□□□□ -0.37
CSTF1-208ENST00000613138 WDFY3Q8IZQ1 3526 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ZFC3H1O60293 1989 aaKnown RBP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 SPTY2D1-AS1A0A0U1RR47 76 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ZNF487B1APH4 448 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 FZD6O60353 706 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 SOCS5O75159 536 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 PIAS2O75928 621 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ELFN1P0C7U0 828 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 GIMD1P0DJR0 217 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 DGKAP23743 735 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 HSPA9P38646 679 aaKnown RBP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 RXRGP48443 463 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 SKOR1P84550 965 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ZNF211Q13398 564 aaPredicted RBP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 C1orf61Q13536 156 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 INPP5AQ14642 412 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 LRRC14Q15048 493 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ACOX1Q15067 660 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ODF2Q5BJF6 829 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ALG1LQ6GMV1 187 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 TIGD7Q6NT04 549 aaPredicted RBP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 BBS5Q8N3I7 341 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 SPATA22Q8NHS9 363 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 AGAP3Q96P47 875 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 RBM15Q96T37 977 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 SCNM1Q9BWG6 230 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 CNTNAP3Q9BZ76 1288 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 POLR1EQ9GZS1 481 aaKnown RBP12.71□□□□□ -0.37
CSTF1-208ENST00000613138 ERVMER34-1Q9H9K5 563 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 UBP1Q9NZI7 540 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 CD84Q9UIB8 345 aa12.71□□□□□ -0.37
CSTF1-208ENST00000613138 IGF2RP11717 2491 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms