RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 MTM1Q13496 603 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 CAMK4Q16566 473 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 C14orf28Q4W4Y0 310 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 VWA3BQ502W6 1294 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 INO80DQ53TQ3 878 aaPredicted RBP23.58■■□□□ 1.37
MMP28-203ENST00000612672 STRADAQ7RTN6 431 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 FAM46DQ8NEK8 389 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 OR6C4Q8NGE1 309 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 SLC30A5Q8TAD4 765 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 C11orf70Q9BRQ4 267 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 PDFQ9HBH1 243 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 RDH14Q9HBH5 336 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 LRIT1Q9P2V4 623 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 DAAM1Q9Y4D1 1078 aa23.58■■□□□ 1.37
MMP28-203ENST00000612672 USP9YO00507 2555 aaPredicted RBP23.57■■□□□ 1.36
MMP28-203ENST00000612672 B4GAT1O43505 415 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 TNFP01375 233 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 CYP1A1P04798 512 aaPredicted RBP23.57■■□□□ 1.36
MMP28-203ENST00000612672 UCHL3P15374 230 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 FMO1Q01740 532 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 TLE1Q04724 770 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 RAD51Q06609 339 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 SERINC3Q13530 473 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 PHF19Q5T6S3 580 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 ZNF574Q6ZN55 896 aaPredicted RBP23.57■■□□□ 1.36
MMP28-203ENST00000612672 TAF8Q7Z7C8 310 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 CAMK1DQ8IU85 385 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 NSMCE3Q96MG7 304 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 LGR4Q9BXB1 951 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 SUV39H2Q9H5I1 410 aa23.57■■□□□ 1.36
MMP28-203ENST00000612672 USP9XQ93008 2570 aaPredicted RBP23.57■■□□□ 1.36
MMP28-203ENST00000612672 A0A1W2PQC6 194 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 XPAP23025 273 aaPredicted RBP23.56■■□□□ 1.36
MMP28-203ENST00000612672 MAZP56270 477 aaKnown RBP23.56■■□□□ 1.36
MMP28-203ENST00000612672 KIAA1024LP59773 190 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 SPECC1LQ69YQ0 1117 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 MSANTD4Q8NCY6 345 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 OR56A4Q8NGH8 313 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 CASKIN2Q8WXE0 1202 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 NTAN1Q96AB6 310 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 NCAPGQ9BPX3 1015 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 NUDT22Q9BRQ3 303 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 SLC12A9Q9BXP2 914 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 SEPT10Q9P0V9 454 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 ATP8A1Q9Y2Q0 1164 aa23.56■■□□□ 1.36
MMP28-203ENST00000612672 J3KR12 359 aa23.55■■□□□ 1.36
MMP28-203ENST00000612672 PRKCSHP14314 528 aaPredicted RBP23.55■■□□□ 1.36
MMP28-203ENST00000612672 PNLIPP16233 465 aa23.55■■□□□ 1.36
MMP28-203ENST00000612672 RFC1P35251 1148 aaPredicted RBP23.55■■□□□ 1.36
MMP28-203ENST00000612672 SUOXP51687 545 aa23.55■■□□□ 1.36
MMP28-203ENST00000612672 PTRH1Q86Y79 214 aaKnown RBP23.55■■□□□ 1.36
MMP28-203ENST00000612672 RCBTB1Q8NDN9 531 aa23.55■■□□□ 1.36
MMP28-203ENST00000612672 CMKLR1Q99788 373 aa23.55■■□□□ 1.36
MMP28-203ENST00000612672 TUBGCP2Q9BSJ2 902 aa23.55■■□□□ 1.36
MMP28-203ENST00000612672 SLC25A18Q9H1K4 315 aa23.55■■□□□ 1.36
MMP28-203ENST00000612672 GEMIN8Q9NWZ8 242 aaKnown RBP23.55■■□□□ 1.36
MMP28-203ENST00000612672 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.54■■□□□ 1.36
MMP28-203ENST00000612672 PPFIA2O75334 1257 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 RECQL5O94762 991 aaPredicted RBP23.54■■□□□ 1.36
MMP28-203ENST00000612672 EPHB2P29323 1055 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 OR1D5P58170 312 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 MAP9Q49MG5 647 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 EFHC2Q5JST6 749 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 DNAAF5Q86Y56 855 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 NRROSQ86YC3 692 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 LURAP1LQ8IV03 231 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 HCAR2Q8TDS4 363 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 PTCD2Q8WV60 388 aaKnown RBP23.54■■□□□ 1.36
MMP28-203ENST00000612672 TMEM159Q96B96 161 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 PCDHB18PQ96TA0 734 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 GANQ9H2C0 597 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 SPATS2LQ9NUQ6 558 aaKnown RBP23.54■■□□□ 1.36
MMP28-203ENST00000612672 ST14Q9Y5Y6 855 aa23.54■■□□□ 1.36
MMP28-203ENST00000612672 GFPT2O94808 682 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 FUCA1P04066 466 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 KLK7P49862 253 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 AMZ1Q400G9 498 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 C17orf82Q86X59 251 aaPredicted RBP23.53■■□□□ 1.36
MMP28-203ENST00000612672 STK33Q9BYT3 514 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 EPN3Q9H201 632 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 DPEP2Q9H4A9 486 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 CYP4F12Q9HCS2 524 aa23.53■■□□□ 1.36
MMP28-203ENST00000612672 UBA2Q9UBT2 640 aaPredicted RBP23.53■■□□□ 1.36
MMP28-203ENST00000612672 WASH4PA8MWX3 477 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 CCP110O43303 1012 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 NUDT21O43809 227 aaKnown RBP23.52■■□□□ 1.36
MMP28-203ENST00000612672 FGF3P11487 239 aaPredicted RBP23.52■■□□□ 1.36
MMP28-203ENST00000612672 YBEYP58557 167 aaPredicted RBP23.52■■□□□ 1.36
MMP28-203ENST00000612672 CDR2Q01850 454 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 ARHGEF7Q14155 803 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 SKIDA1Q1XH10 827 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 ERAP2Q6P179 960 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 WDR59Q6PJI9 974 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 LIPIQ6XZB0 460 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 ZNF438Q7Z4V0 828 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 SLFN11Q7Z7L1 901 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 UMODL1-AS1Q8N2C9 162 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 ATL2Q8NHH9 583 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 PATE1Q8WXA2 126 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 NKD1Q969G9 470 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms