RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 RAD21L1Q9H4I0 556 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 VTA1Q9NP79 307 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 VPS28Q9UK41 221 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 ACOT9Q9Y305 439 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 MT-CYBP00156 380 aaPredicted RBP11.09□□□□□ -0.63
CDH4-202ENST00000611855 C8BP07358 591 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 CES1P23141 567 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 PTPN9P43378 593 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 TNK2Q07912 1038 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 SIX5Q8N196 739 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 SGCDQ92629 289 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 HTRA1Q92743 480 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 ALPK1Q96QP1 1244 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 GPR20Q99678 358 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 MARCH7Q9H992 704 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 PALMDQ9NP74 551 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 SPAG4Q9NPE6 437 aa11.09□□□□□ -0.63
CDH4-202ENST00000611855 IFT80Q9P2H3 777 aaPredicted RBP11.09□□□□□ -0.63
CDH4-202ENST00000611855 NR5A2O00482 541 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 SRP72O76094 671 aaKnown RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 AP2A1O95782 977 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 MTHFD1P11586 935 aaKnown RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 OXTRP30559 389 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 ATICP31939 592 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 ICAM3P32942 547 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 RPS3AP61247 264 aaKnown RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 LRP8Q14114 963 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 EPHX4Q8IUS5 362 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 ZNF420Q8TAQ5 688 aaPredicted RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 SPPL2BQ8TCT7 592 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 HEXDCQ8WVB3 486 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 GOLGA2P5Q9HBQ8 144 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 PIGVQ9NUD9 493 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 KLK14Q9P0G3 267 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 KLQ9UEF7 1012 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 HACL1Q9UJ83 578 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 FAM95CA0A1B0GW59 222 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 FAM47E-STBD1D6RA91 191 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 XYLBO75191 536 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 SNAP29O95721 258 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 HSPA8P11142 646 aaKnown RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 CDH13P55290 713 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 TPD52P55327 224 aaPredicted RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 TAS2R39P59534 338 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 POLD3Q15054 466 aaPredicted RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 KIF19Q2TAC6 998 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 FBXO48Q5FWF7 155 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 ESRP1Q6NXG1 681 aaKnown RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 SLC26A9Q7LBE3 791 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 IPMKQ8NFU5 416 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 ABHD11Q8NFV4 315 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 SLC7A14Q8TBB6 771 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 CAMKK2Q96RR4 588 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 CCDC90BQ9GZT6 254 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 NANOGQ9H9S0 305 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 EIF2B3Q9NR50 452 aaKnown RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 SETD4Q9NVD3 440 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 SUCOQ9UBS9 1254 aaKnown RBP11.08□□□□□ -0.64
CDH4-202ENST00000611855 DSEQ9UL01 958 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 GJA3Q9Y6H8 435 aa11.08□□□□□ -0.64
CDH4-202ENST00000611855 HACD1B0YJ81 288 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 I6L893 689 aaPredicted RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 ZNF701M0R085 212 aaPredicted RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 AP3B1O00203 1094 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 CCL22O00626 93 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 CLASP2O75122 1294 aaKnown RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 BEST1O76090 585 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 NCK1P16333 377 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 MYF6P23409 242 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 PRKAA2P54646 552 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 STX5Q13190 355 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 SLC12A1Q13621 1099 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 GEN1Q17RS7 908 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 RBM20Q5T481 1227 aaKnown RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 NEPROQ6NW34 567 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 CATSPERGQ6ZRH7 1159 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 SNX19Q92543 992 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 GPR22Q99680 433 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 C11orf84Q9BUA3 381 aaPredicted RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 IL22Q9GZX6 179 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 IPO11Q9UI26 975 aaKnown RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 CLDN25C9JDP6 229 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 DLGAP1O14490 977 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 TRIM24O15164 1050 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 SYNCRIPO60506 623 aaKnown RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 IL10P22301 178 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 TTKP33981 857 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 ARL1P40616 181 aaPredicted RBP11.07□□□□□ -0.64
CDH4-202ENST00000611855 CASP2P42575 452 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 IMPG1Q17R60 797 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 VPS26BQ4G0F5 336 aa11.07□□□□□ -0.64
CDH4-202ENST00000611855 ZNF789Q5FWF6 425 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms