RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 NR6A1Q15406 480 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 RBM20Q5T481 1227 aaKnown RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 MSANTD2Q6P1R3 559 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 CNSTQ6PJW8 725 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 RANBP10Q6VN20 620 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 ARHGAP36Q6ZRI8 547 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 GLT6D1Q7Z4J2 308 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 OR4K2Q8NGD2 314 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 OR56A4Q8NGH8 313 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 DDI1Q8WTU0 396 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 CCDC138Q96M89 665 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 SH3GL3Q99963 347 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 NMUR1Q9HB89 426 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 MYH1P12882 1939 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 COL24A1Q17RW2 1714 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 SAC3D1A6NKF1 404 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 A8MT66 165 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 CD3EAPO15446 510 aaKnown RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 PSMC3P17980 439 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 SP100P23497 879 aaPredicted RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 RPL5P46777 297 aaKnown RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 MAPKAPK2P49137 400 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 ATN1P54259 1190 aaPredicted RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 GNA12Q03113 381 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 PRKG2Q13237 762 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 RBBP7Q16576 425 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 RNF219Q5W0B1 726 aaPredicted RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 ALKAL1Q6UXT8 129 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 LRRTM3Q86VH5 581 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 ADCY4Q8NFM4 1077 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 UCMAQ8WVF2 138 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 C2orf49Q9BVC5 232 aaPredicted RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 WWOXQ9NZC7 414 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 CCDC88AQ3V6T2 1871 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 DPPA5A6NC42 116 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 SEC24DO94855 1032 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 ROR2Q01974 943 aaKnown RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 PRKCZQ05513 592 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 IL10RBQ08334 325 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 TRIP4Q15650 581 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 UPP1Q16831 310 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 TBCELQ5QJ74 424 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 NAIF1Q69YI7 327 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 EPGNQ6UW88 154 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 BEND5Q7L4P6 421 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 HOMEZQ8IX15 550 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 MYO1HQ8N1T3 1032 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 MIER2Q8N344 545 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 GALNT15Q8N3T1 639 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 HMCESQ96FZ2 354 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 C8orf48Q96LL4 319 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 UNC93B1Q9H1C4 597 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 C6orf203Q9P0P8 240 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 FAM8A1Q9UBU6 413 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 PCDHB9Q9Y5E1 797 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 AP4B1Q9Y6B7 739 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 USP3Q9Y6I4 520 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 V9GYQ6 96 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 MYH6P13533 1939 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 C15orf38-AP3S2A0A0A6YYH1 394 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 PGM3O95394 542 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 PKMP14618 531 aaKnown RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 LPOP22079 712 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 NNMTP40261 264 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 THOP1P52888 689 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 PGGT1BP53609 377 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 SMARCB1Q12824 385 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 TRIM25Q14258 630 aaKnown RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 EML3Q32P44 896 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 XKR4Q5GH76 650 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 UGT3A1Q6NUS8 523 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 ARPINQ7Z6K5 226 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 DSELQ8IZU8 1212 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 CDYL2Q8N8U2 506 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 UPF1Q92900 1129 aaKnown RBP eCLIP6.4□□□□□ -1.39
SNX13-213ENST00000611725 C11orf84Q9BUA3 381 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 SENP6Q9GZR1 1112 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 FAM192AQ9GZU8 254 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 KATNBL1Q9H079 304 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 HMX1Q9NP08 348 aaPredicted RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 WARS2Q9UGM6 360 aaKnown RBP6.4□□□□□ -1.39
SNX13-213ENST00000611725 POLG2Q9UHN1 485 aa6.4□□□□□ -1.39
SNX13-213ENST00000611725 CCDC189A1A4V9 331 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TMEM233B4DJY2 109 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ACSL4O60488 711 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CCNT2O60583 730 aaKnown RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 URODP06132 367 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 UQCRBP14927 111 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ITGAXP20702 1163 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CD68P34810 354 aaPredicted RBP6.39□□□□□ -1.39
SNX13-213ENST00000611725 LCP2Q13094 533 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 SEMA3BQ13214 749 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 NOGQ13253 232 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 ISLR2Q6UXK2 745 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 IFNL1Q8IU54 200 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CFAP52Q8N1V2 620 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 CARNMT1Q8N4J0 409 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 TCF12Q99081 682 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 NPAS2Q99743 824 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 THUMPD3Q9BV44 507 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms