RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PPTC7Q8NI37 304 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 TRPC4APQ8TEL6 797 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 SMOQ99835 787 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 NPLQ9BXD5 320 aaPredicted RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 NAA50Q9GZZ1 169 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 WDCPQ9H6R7 721 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 EML4Q9HC35 981 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 POLR2AP24928 1970 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 FZD9O00144 591 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CACNG3O60359 315 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 HSPA8P11142 646 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CD247P20963 164 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 GPX3P22352 226 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 VARSP26640 1264 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 AIF1P55008 147 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 NAA20P61599 178 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CCNA1P78396 465 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 POU4F1Q01851 419 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZBTB46Q86UZ6 589 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 LRRC43Q8N309 656 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 SH3RF2Q8TEC5 729 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 GIPC3Q8TF64 312 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CYGBQ8WWM9 190 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CXorf21Q9HAI6 301 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CRTAC1Q9NQ79 661 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 TREX1Q9NSU2 369 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 OAZ3Q9UMX2 235 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 COL1A2P08123 1366 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 A0A1W2PPW3 197 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 DHRS12A0PJE2 317 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 WARSP23381 471 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 POLD2P49005 469 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 PSMD7P51665 324 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 ARL13BQ3SXY8 428 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 VPS26BQ4G0F5 336 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 GPR107Q5VW38 600 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 FASTKD5Q7L8L6 764 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 CHST15Q7LFX5 561 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 FAM35AQ86V20 835 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 CAMK1DQ8IU85 385 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 KLHDC8BQ8IXV7 354 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 CMTR2Q8IYT2 770 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 AFAP1L2Q8N4X5 818 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZMIZ2Q8NF64 920 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 HIPK3Q9H422 1215 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 SOX17Q9H6I2 414 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 RPF2Q9H7B2 306 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 AGPAT4Q9NRZ5 378 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 AAR2Q9Y312 384 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 DNAH12Q6ZR08 3092 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 A0A0G2JLL6 359 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 A0A0J9YYE9 177 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 RNF103-CHMP3A0A140T963 221 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 H3BMQ9 156 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 PPP6CO00743 305 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 GPR32O75388 356 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 SUPT7LO94864 414 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 STAMBPO95630 424 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 CAPN3P20807 821 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 SOX11P35716 441 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 CDH13P55290 713 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 KIF19Q2TAC6 998 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 SV2CQ496J9 727 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 FGD3Q5JSP0 725 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 INTS11Q5TA45 600 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 NEPROQ6NW34 567 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 XKR5Q6UX68 686 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 HACD2Q6Y1H2 254 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 TMEM26Q6ZUK4 368 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 PRRT2Q7Z6L0 340 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 ERO1BQ86YB8 467 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 ARRDC4Q8NCT1 418 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 COG8Q96MW5 612 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 GPATCH1Q9BRR8 931 aaKnown RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 RHOBTB2Q9BYZ6 727 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 SIK2Q9H0K1 926 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 ALG9Q9H6U8 611 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 GLOD4Q9HC38 313 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 TUBA8Q9NY65 449 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 CSADQ9Y600 493 aa15.18■□□□□ 0.02
PCDHGB1-202ENST00000611598 AP3B1O00203 1094 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 SUPT3HO75486 399 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZNF189O75820 626 aaPredicted RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 LTA4HP09960 611 aaKnown RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 SLC36A3Q495N2 470 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 AARS2Q5JTZ9 985 aaKnown RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 AGAP9Q5VTM2 703 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 LDB1Q86U70 411 aaPredicted RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 SLC15A3Q8IY34 581 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 PPP1R14BQ96C90 147 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 C19orf60Q96EN9 201 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 PAIP1Q9H074 479 aaKnown RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 AKTIPQ9H8T0 292 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 DSEQ9UL01 958 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 PIN4Q9Y237 131 aaKnown RBP15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 FXYD1O00168 92 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 GIPC1O14908 333 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 DNAJB2P25686 324 aa15.17■□□□□ 0.02
PCDHGB1-202ENST00000611598 ADRA1AP35348 466 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms