RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	MCU	Q8NE86	351 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CADM4	Q8NFZ8	388 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	DNASE2B	Q8WZ79	361 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	HMCES	Q96FZ2	354 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TTC25	Q96NG3	672 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	DDX50	Q9BQ39	737 aa	Known RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TMEM245	Q9H330	911 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ZNF212	Q9UDV6	495 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	RSPH14	Q9UHP6	348 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	WASF3	Q9UPY6	502 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ZZEF1	O43149	2961 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	METTL12	A8MUP2	240 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	MATN3	O15232	486 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	POLR3G	O15318	223 aa	Predicted RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	BCAT2	O15382	392 aa	Predicted RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	RAMP2	O60895	175 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	IGLV3-19	P01714	112 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	DNTT	P04053	509 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	DLD	P09622	509 aa	Known RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	MYZAP	P0CAP1	466 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CCNB1	P14635	433 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ST8SIA6	P61647	398 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	RPS24	P62847	133 aa	Known RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	IFI35	P80217	286 aa	Predicted RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CDH18	Q13634	790 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	PTPRN	Q16849	979 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	KRT71	Q3SY84	523 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	NAXD	Q8IW45	347 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	PDCD7	Q8N8D1	485 aa	Known RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	GANC	Q8TET4	914 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	PYROXD1	Q8WU10	500 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ARL8A	Q96BM9	186 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TEKT5	Q96M29	485 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SERPINB12	Q96P63	405 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ZDHHC5	Q9C0B5	715 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	GBA3	Q9H227	469 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CENPH	Q9H3R5	247 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TMBIM4	Q9HC24	238 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	EIF2B3	Q9NR50	452 aa	Known RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	IPO11	Q9UI26	975 aa	Known RBP	13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	KLK13	Q9UKR3	277 aa		13.69	□□□□□ -0.22
PPHLN1-223	ENST00000610488	AVIL	O75366	819 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	NFKB1	P19838	968 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ACSL1	P33121	698 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CD68	P34810	354 aa	Predicted RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	NUMB	P49757	651 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CDH4	P55283	916 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	RPS14	P62263	151 aa	Known RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SARNP	P82979	210 aa	Known RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CDK16	Q00536	496 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	POLD3	Q15054	466 aa	Predicted RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TTC31	Q49AM3	519 aa	Predicted RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TTMP	Q5BVD1	217 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	MPP7	Q5T2T1	576 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CAPN12	Q6ZSI9	719 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CAND1	Q86VP6	1230 aa	Known RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ZNF557	Q8N988	423 aa	Predicted RBP	13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	FBXO36	Q8NEA4	188 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	MTG2	Q9H4K7	406 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	RETREG1	Q9H6L5	497 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	GAREM1	Q9H706	876 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	VPS37B	Q9H9H4	285 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SP110	Q9HB58	689 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	LRRC4C	Q9HCJ2	640 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	PRSS16	Q9NQE7	514 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ZMIZ1	Q9ULJ6	1067 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	PTPRB	P23467	1997 aa		13.68	□□□□□ -0.22
PPHLN1-223	ENST00000610488	FREM2	Q5SZK8	3169 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TLDC2	A0PJX2	215 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SMIM23	A6NLE4	172 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	RRP9	O43818	475 aa	Known RBP	13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	GJB3	O75712	270 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	NEBL	O76041	1014 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SEMA4F	O95754	770 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CER1	O95813	267 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ABHD2	P08910	425 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CSK	P41240	450 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ELK3	P41970	407 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	YBEY	P58557	167 aa	Predicted RBP	13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SLC14A1	Q13336	389 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	TRIP6	Q15654	476 aa	Known RBP	13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	PARP15	Q460N3	678 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ZNF776	Q68DI1	518 aa	Predicted RBP	13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	ZNF534	Q76KX8	674 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CHCHD4	Q8N4Q1	142 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SETD7	Q8WTS6	366 aa	Known RBP	13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	IL12RB2	Q99665	862 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	WDR83	Q9BRX9	315 aa	Known RBP	13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	BTBD1	Q9H0C5	482 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	FBRS	Q9HAH7	460 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	IL21R	Q9HBE5	538 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	VPS18	Q9P253	973 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	SUN2	Q9UH99	717 aa		13.67	□□□□□ -0.22
PPHLN1-223	ENST00000610488	CHMP2B	Q9UQN3	213 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms