RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 IFT43Q96FT9 208 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 APOLD1Q96LR9 279 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 RNF157Q96PX1 679 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 SEMA3CQ99985 751 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 LRRC61Q9BV99 259 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 DTLQ9NZJ0 730 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 APOBEC3BQ9UH17 382 aaKnown RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 U3KQA8 63 aa12.35□□□□□ -0.43
CTSA-210ENST00000606000 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
CTSA-210ENST00000606000 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.34□□□□□ -0.43
CTSA-210ENST00000606000 NPIPB15A6NHN6 443 aaPredicted RBP12.34□□□□□ -0.43
CTSA-210ENST00000606000 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 H3BM21 787 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 CASC3O15234 703 aaKnown RBP12.34□□□□□ -0.43
CTSA-210ENST00000606000 AQP9O43315 295 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 SOCS5O75159 536 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 GCATO75600 419 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 CAPNS1P04632 268 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 ALPIP09923 528 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 CKMT2P17540 419 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 ARHGAP25P42331 645 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 HNRNPKP61978 463 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTSA-210ENST00000606000 DYNLT1P63172 113 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 DAB2P98082 770 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 ITKQ08881 620 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 NIPAL4Q0D2K0 466 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 IFI16Q16666 785 aaKnown RBP12.34□□□□□ -0.43
CTSA-210ENST00000606000 ALG11Q2TAA5 492 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 HES3Q5TGS1 186 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 MAP7D3Q8IWC1 876 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 BBS5Q8N3I7 341 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
CTSA-210ENST00000606000 MDM1Q8TC05 714 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 TSACCQ96A04 125 aaPredicted RBP12.34□□□□□ -0.43
CTSA-210ENST00000606000 PDXPQ96GD0 296 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 LGMNQ99538 433 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 APOOQ9BUR5 198 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 CEP41Q9BYV8 373 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 CLPBQ9H078 707 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 RBM22Q9NW64 420 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTSA-210ENST00000606000 NLGN3Q9NZ94 848 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 LCMT1Q9UIC8 334 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 HEY1Q9Y5J3 304 aa12.34□□□□□ -0.43
CTSA-210ENST00000606000 MYLKQ15746 1914 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 FRYQ5TBA9 3013 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 WDFY3Q8IZQ1 3526 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 AKAP13Q12802 2813 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 KCNK1O00180 336 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 TAF4O00268 1085 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 MATN3O15232 486 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 PGLSO95336 258 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 LCA5LO95447 670 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 ACP1P24666 158 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 CCNCP24863 283 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 VIPR1P32241 457 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 MAGEA1P43355 309 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 YPEL5P62699 121 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 ZBTB17Q13105 803 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 CAMK2BQ13554 666 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 PTK2BQ14289 1009 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 NFATC4Q14934 902 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 ACOX1Q15067 660 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 AGERQ15109 404 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 PRRT3Q5FWE3 981 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 FAXCQ5TGI0 409 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 SLC9A4Q6AI14 798 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 TIGD7Q6NT04 549 aaPredicted RBP12.33□□□□□ -0.44
CTSA-210ENST00000606000 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 MFSD7Q6UXD7 560 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 RFLNAQ6ZTI6 216 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 HSD11B1LQ7Z5J1 315 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 RFX6Q8HWS3 928 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 CCDC13Q8IYE1 715 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 CCNYQ8ND76 341 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 ARRDC2Q8TBH0 407 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 PIH1D2Q8WWB5 315 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 HDAC11Q96DB2 347 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 MRFAP1L1Q96HT8 127 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 COQ10AQ96MF6 247 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 TSGA13Q96PP4 275 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 LGR4Q9BXB1 951 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 POLR1EQ9GZS1 481 aaKnown RBP12.33□□□□□ -0.44
CTSA-210ENST00000606000 MRPL40Q9NQ50 206 aaKnown RBP12.33□□□□□ -0.44
CTSA-210ENST00000606000 SALL4Q9UJQ4 1053 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 INTUQ9ULD6 942 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 PCDHA13Q9Y5I0 950 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 RAI2Q9Y5P3 530 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 KNL1Q8NG31 2342 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 CABIN1Q9Y6J0 2220 aa12.33□□□□□ -0.44
CTSA-210ENST00000606000 RCCD1A6NED2 376 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 TMEM202A6NGA9 273 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 APOL1O14791 398 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 SPOPO43791 374 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 FZD6O60353 706 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 HEXIM1O94992 359 aaKnown RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 KRT10P13645 584 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms