RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 MT-CYBP00156 380 aaPredicted RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 TRBC1P01850 177 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 CYP2A6P11509 494 aaPredicted RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 ITIH2P19823 946 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 TGM1P22735 817 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 VIPR1P32241 457 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 AFF3P51826 1226 aaKnown RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 EPHB1P54762 984 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 WNT3AP56704 352 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 RALGDSQ12967 914 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 SNX1Q13596 522 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 PRPSAP1Q14558 356 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 CYP1B1Q16678 543 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 PARP6Q2NL67 630 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 SEL1L3Q68CR1 1132 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 NAPEPLDQ6IQ20 393 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 CCDC70Q6NSX1 233 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 KDELC1Q6UW63 502 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 ARHGEF18Q6ZSZ5 1173 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 KLHDC8BQ8IXV7 354 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 CBARPQ8N350 705 aaPredicted RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 FAM174AQ8TBP5 190 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 CCDC110Q8TBZ0 833 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 OXNAD1Q96HP4 312 aaPredicted RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 SERAC1Q96JX3 654 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 LYSMD1Q96S90 227 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 SRPK1Q96SB4 655 aaKnown RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 C1QTNF7Q9BXJ2 289 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 TM9SF3Q9HD45 589 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 RNF14Q9UBS8 474 aa13.94□□□□□ -0.18
RNF40-212ENST00000602784 AAR2Q9Y312 384 aaKnown RBP13.94□□□□□ -0.18
RNF40-212ENST00000602784 CACNA1EQ15878 2313 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 PSMD11O00231 422 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 KHNYNO15037 678 aaKnown RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 MMP20O60882 483 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 PMPCBO75439 489 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 TM7SF2O76062 418 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 NDST3O95803 873 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 HNRNPA2B1P22626 353 aaKnown RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 AKT2P31751 481 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 HNF1BP35680 557 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 LIG3P49916 1009 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 GEMP55040 296 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 GDF10P55107 478 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 LMNB2Q03252 620 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 SPEM2Q0P670 501 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 OVGP1Q12889 678 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 FGL2Q14314 439 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 TEAD4Q15561 434 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 QPCTQ16769 361 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 FAM182AQ5T1J6 154 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 LIPIQ6XZB0 460 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 NYAP1Q6ZVC0 841 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 IQCHQ86VS3 1027 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 RAVER1Q8IY67 606 aaKnown RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 ZCCHC9Q8N567 271 aaKnown RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 C12orf50Q8NA57 414 aaPredicted RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 TMEM145Q8NBT3 493 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 DENND6BQ8NEG7 585 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 IFT43Q96FT9 208 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 WRAP53Q9BUR4 548 aaKnown RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 MLPHQ9BV36 600 aaPredicted RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 CAPN10Q9HC96 672 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 SEMA4GQ9NTN9 838 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 B4GALT6Q9UBX8 382 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 SLC6A14Q9UN76 642 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 HS3ST3A1Q9Y663 406 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 PTPRZ1P23471 2315 aaPredicted RBP13.93□□□□□ -0.18
RNF40-212ENST00000602784 PI4KAP42356 2102 aa13.93□□□□□ -0.18
RNF40-212ENST00000602784 RALGAPA1Q6GYQ0 2036 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 GOLGA6L10A0A0M3HER8 536 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 GOLGA6CA6NDK9 693 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 GOLGA6BA6NDN3 693 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 CAPN8A6NHC0 703 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 NPIPB15A6NHN6 443 aaPredicted RBP13.92□□□□□ -0.18
RNF40-212ENST00000602784 ZNF185O15231 689 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 FANCGO15287 622 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 SLC31A1O15431 190 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 HEXIM1O94992 359 aaKnown RBP13.92□□□□□ -0.18
RNF40-212ENST00000602784 PAK4O96013 591 aaPredicted RBP13.92□□□□□ -0.18
RNF40-212ENST00000602784 TUBB4AP04350 444 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 PRKCGP05129 697 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 ELFN1P0C7U0 828 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 GOLGA6DP0CG33 693 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 C6P13671 934 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 ZNF30P17039 623 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 PSMB4P28070 264 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 ACTN2P35609 894 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 TNNT3P45378 269 aaPredicted RBP13.92□□□□□ -0.18
RNF40-212ENST00000602784 PCSK7Q16549 785 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 TRIM61Q5EBN2 209 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 CREG2Q8IUH2 290 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 DCLK2Q8N568 766 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 CCDC89Q8N998 374 aa13.92□□□□□ -0.18
RNF40-212ENST00000602784 MFSD2AQ8NA29 543 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms