RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PGRP06401 933 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 NKX2-5P52952 324 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 KYAT3Q6YP21 454 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CBR4Q8N4T8 237 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 TOR1AIP2Q8NFQ8 470 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 VAT1Q99536 393 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 POLR3BQ9NW08 1133 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SSR3Q9UNL2 185 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 A0A087WZ62 844 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 RGSL1A5PLK6 1076 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SGTAO43765 313 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 FOSL1P15407 271 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CYP2A7P20853 494 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 BACE1P56817 501 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SYT15Q9BQS2 421 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 FDXACB1Q9BRP7 624 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CNPPD1Q9BV87 410 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 GANQ9H2C0 597 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 ALG9Q9H6U8 611 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 PTGFRNQ9P2B2 879 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 TBC1D14Q9P2M4 693 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 C9IYK1 514 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 THRBP10828 461 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 RENBPP51606 427 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 GJA9P57773 515 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MAD2L1Q13257 205 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 NADK2Q4G0N4 442 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 INO80DQ53TQ3 878 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 NIPAL1Q6NVV3 410 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 RNF44Q7L0R7 432 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CATSPERZQ9NTU4 200 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 OR6C70A6NIJ9 312 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 PEX14O75381 377 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 IFNA7P01567 189 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MMP13P45452 471 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MAPK12P53778 367 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 DEF8Q6ZN54 512 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MTFMTQ96DP5 389 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CHST7Q9NS84 486 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 POLLQ9UGP5 575 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SCAMP1O15126 338 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF615Q8N8J6 731 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 PGLYRP2Q96PD5 576 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SPAG4Q9NPE6 437 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 VPS51Q9UID3 782 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CCDC88CQ9P219 2028 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 KNTC1P50748 2209 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 A8MX80 341 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 GLRA2P23416 452 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 KCNA10Q16322 511 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CRY1Q16526 586 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 METTL6Q8TCB7 284 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 REPS1Q96D71 796 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 DDX43Q9NXZ2 648 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SNTG2Q9NY99 539 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SAMHD1Q9Y3Z3 626 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 AURKAO14965 403 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MDM4O15151 490 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 ORC5O43913 435 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 DHFRP00374 187 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 DPEP1P16444 411 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 PAICSP22234 425 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CAP2P40123 477 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MMP14P50281 582 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 TNFAIP8L3Q5GJ75 292 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 KCNT2Q6UVM3 1135 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CENPSQ8N2Z9 138 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 REXO2Q9Y3B8 237 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 TECPR2O15040 1411 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 DIP2BQ9P265 1576 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 IRF6O14896 467 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MAGEB3O15480 346 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 ITGB1P05556 798 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 MAGEA8P43361 318 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 FCGRTP55899 365 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SREBF2Q12772 1141 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 DEFB128Q7Z7B8 93 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 TTC29Q8NA56 475 aaPredicted RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 C12orf43Q96C57 262 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 TAS2R13Q9NYV9 303 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF432O94892 652 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SUZ12Q15022 739 aaKnown RBP8.73□□□□□ -1.01
CSMD1-216ENST00000602557 GRIK4Q16099 956 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 ANO7Q6IWH7 933 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 CDK20Q8IZL9 346 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SPERTQ8NA61 448 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 GRIN3AQ8TCU5 1115 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 SETD4Q9NVD3 440 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 PNPOQ9NVS9 261 aa8.73□□□□□ -1.01
CSMD1-216ENST00000602557 FUT4P22083 530 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 EPHA3P29320 983 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SDC2P34741 201 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 UAP1L1Q3KQV9 507 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 SLC30A10Q6XR72 485 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 LGI2Q8N0V4 545 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
CSMD1-216ENST00000602557 BHLHE41Q9C0J9 482 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF350Q9GZX5 532 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms