RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 LIPIQ6XZB0 460 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 CCDC13Q8IYE1 715 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 CHCHD4Q8N4Q1 142 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 OR4C6Q8NH72 309 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 TBATAQ96M53 351 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 OLFM3Q96PB7 478 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 MCCC1Q96RQ3 725 aaPredicted RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 SEMA3CQ99985 751 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 TMEM121BQ9BXQ6 578 aaPredicted RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 MBNL1Q9NR56 388 aaKnown RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 IMPACTQ9P2X3 320 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 KLK13Q9UKR3 277 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 PHTF1Q9UMS5 762 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 COQ6Q9Y2Z9 468 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 MSRB2Q9Y3D2 182 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 ALG6Q9Y672 507 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 MYLKQ15746 1914 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 BTNL10A8MVZ5 291 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 LZTS3O60299 673 aaPredicted RBP17.26■□□□□ 0.35
HERC3-214ENST00000601319 FZD6O60353 706 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 C1SP09871 688 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 CDK4P11802 303 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 SPINK2P20155 84 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 VIPR1P32241 457 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 CDKN2BP42772 138 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 IFI35P80217 286 aaPredicted RBP17.26■□□□□ 0.35
HERC3-214ENST00000601319 MTM1Q13496 603 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 ODF2Q5BJF6 829 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 KDM7AQ6ZMT4 941 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 KATNAL2Q8IYT4 538 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 PNPLA1Q8N8W4 532 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 ZNF548Q8NEK5 533 aaPredicted RBP17.26■□□□□ 0.35
HERC3-214ENST00000601319 BTN2A2Q8WVV5 523 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 IL12RB2Q99665 862 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 BRD8Q9H0E9 1235 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 RBM22Q9NW64 420 aaKnown RBP eCLIP17.26■□□□□ 0.35
HERC3-214ENST00000601319 UCKL1Q9NWZ5 548 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 KCTD5Q9NXV2 234 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 NLGN3Q9NZ94 848 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 B4GALT6Q9UBX8 382 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 PPIL1Q9Y3C6 166 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 HYOU1Q9Y4L1 999 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 CSNK1G3Q9Y6M4 447 aa17.26■□□□□ 0.35
HERC3-214ENST00000601319 ZZEF1O43149 2961 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 NEMP2A6NFY4 417 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 PSMD11O00231 422 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 PPP1R12AO14974 1030 aaPredicted RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 RECQL5O94762 991 aaPredicted RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 HLA-DQB2P05538 268 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 GIMD1P0DJR0 217 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 GM2AP17900 193 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 CA4P22748 312 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 ACADVLP49748 655 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 SEMG2Q02383 582 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 EIF2B5Q13144 721 aaKnown RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 ILKQ13418 452 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 PDK1Q15118 436 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 ARMC12Q5T9G4 340 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 MFSD7Q6UXD7 560 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 USP45Q70EL2 814 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 CCNYQ8ND76 341 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 TPCN2Q8NHX9 752 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 PDCD6IPQ8WUM4 868 aaKnown RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 GATA6Q92908 595 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 RNF25Q96BH1 459 aaPredicted RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 SCRN2Q96FV2 425 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 COQ10AQ96MF6 247 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 LGMNQ99538 433 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 TDRD1Q9BXT4 1180 aaKnown RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 MAK16Q9BXY0 300 aaKnown RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 TFR2Q9UP52 801 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 REXO2Q9Y3B8 237 aaKnown RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 HEY1Q9Y5J3 304 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 RAI2Q9Y5P3 530 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 SCN8AQ9UQD0 1980 aa17.25■□□□□ 0.35
HERC3-214ENST00000601319 GOLGA4Q13439 2230 aaKnown RBP17.25■□□□□ 0.35
HERC3-214ENST00000601319 TRIM38O00635 465 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 SCAMP1O15126 338 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 RFPL3O75679 317 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 HEXIM1O94992 359 aaKnown RBP17.24■□□□□ 0.35
HERC3-214ENST00000601319 ALPPL2P10696 532 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 CYP2A6P11509 494 aaPredicted RBP17.24■□□□□ 0.35
HERC3-214ENST00000601319 KRT10P13645 584 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 CKMT2P17540 419 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 ACP1P24666 158 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 NR2C2P49116 596 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 RPL26P61254 145 aaKnown RBP17.24■□□□□ 0.35
HERC3-214ENST00000601319 DSC2Q02487 901 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 TFDP2Q14188 446 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 NFATC4Q14934 902 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 CNGA3Q16281 694 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 TFDP3Q5H9I0 405 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 ESRP1Q6NXG1 681 aaKnown RBP17.24■□□□□ 0.35
HERC3-214ENST00000601319 UNQ6494/PRO21346Q6UXR6 183 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 RAD9BQ6WBX8 426 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 TMPRSS7Q7RTY8 843 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 RFX6Q8HWS3 928 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 TMEM139Q8IV31 216 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 GALNT15Q8N3T1 639 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 ARRDC2Q8TBH0 407 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms