RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 TRAF6Q9Y4K3 522 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 KCTD3Q9Y597 815 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 SLC4A7Q9Y6M7 1214 aa20.32■□□□□ 0.84
SHKBP1-225ENST00000600733 A0A1B0GVG6 124 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 SMIM31A0A1B0GVY4 71 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 GPC4O75487 556 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 CSPG5O95196 566 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 CAPNS1P04632 268 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 MMP2P08253 660 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 ATP6V1B1P15313 513 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 MAPRE1Q15691 268 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 NRF1Q16656 503 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 AFAP1L2Q8N4X5 818 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 METTL25Q8N6Q8 603 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 HDAC10Q969S8 669 aa20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 FBRSL1Q9HCM7 1045 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-225ENST00000600733 CNTN5O94779 1100 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 SUPT7LO94864 414 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 RENBPP51606 427 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 SLC14A2Q15849 920 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 ALFQ53S48 1182 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 TSPAN17Q96FV3 270 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 SLC39A3Q9BRY0 314 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 CRYL1Q9Y2S2 319 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 AP4S1Q9Y587 144 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 DOCK4Q8N1I0 1966 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 TRIM24O15164 1050 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 SPATA31D3P0C874 917 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 PSMD8P48556 350 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 MGAT3Q09327 533 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 TUSC3Q13454 348 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 MAPRE2Q15555 327 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 MGAT5BQ3V5L5 792 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 MARC1Q5VT66 337 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 CYP2R1Q6VVX0 501 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 SPATA31D4Q6ZUB0 917 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 ZNF354CQ86Y25 554 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 LRRC49Q8IUZ0 686 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 LPGAT1Q92604 370 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 PSMG2Q969U7 264 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 EME1Q96AY2 570 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 SERPINB11Q96P15 392 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 PRPF18Q99633 342 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 MTG1Q9BT17 334 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 VCX3AQ9NNX9 186 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
SHKBP1-225ENST00000600733 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 GJB3O75712 270 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 S1PR4O95977 384 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 C8BP07358 591 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SNRPB2P08579 225 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 ZNF26P17031 533 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 FGFR3P22607 806 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 THPOP40225 353 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 RPL5P46777 297 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 INHBCP55103 352 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 LSAMPQ13449 338 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SLC5A9Q2M3M2 681 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SLC39A12Q504Y0 691 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 IL31Q6EBC2 164 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 ISCA2Q86U28 154 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SERINC5Q86VE9 423 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 OR52K2Q8NGK3 314 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 LRTOMTQ8WZ04 291 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 EXT2Q93063 718 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 C3orf30Q96M34 536 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 RANBP9Q96S59 729 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 GRIP2Q9C0E4 1043 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SPAG4Q9NPE6 437 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 MRASO14807 208 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 ZNF623O75123 536 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 TNFAIP8O95379 198 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SLC4A1P02730 911 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 AKR1A1P14550 325 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 IMPDH1P20839 514 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 GPR15P49685 360 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 CDH13P55290 713 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 PRAMEP78395 509 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 YWHAHQ04917 246 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 NADK2Q4G0N4 442 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SIRPB2Q5JXA9 342 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 RBM44Q6ZP01 1051 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SLC22A9Q8IVM8 553 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 AHI1Q8N157 1196 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 UMODL1-AS1Q8N2C9 162 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 TRPV1Q8NER1 839 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 PTERQ96BW5 349 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SYT17Q9BSW7 474 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 EPB41L1Q9H4G0 881 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 UXTQ9UBK9 157 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 SARDHQ9UL12 918 aa20.29■□□□□ 0.84
SHKBP1-225ENST00000600733 MROH6A6NGR9 719 aa20.28■□□□□ 0.84
SHKBP1-225ENST00000600733 WASH4PA8MWX3 477 aa20.28■□□□□ 0.84
SHKBP1-225ENST00000600733 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-225ENST00000600733 ZNF678Q5SXM1 525 aa20.28■□□□□ 0.84
SHKBP1-225ENST00000600733 LARP4Q71RC2 724 aaKnown RBP eCLIP20.28■□□□□ 0.84
SHKBP1-225ENST00000600733 SLCO4A1Q96BD0 722 aa20.28■□□□□ 0.84
SHKBP1-225ENST00000600733 SUSD3Q96L08 255 aa20.28■□□□□ 0.84
SHKBP1-225ENST00000600733 ADAM2Q99965 735 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms