RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TEX51A0A1B0GUA7 166 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 K7ERQ8 282 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 NPC1O15118 1278 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 ANXA9O76027 345 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 GSRP00390 522 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 MT-CO1P00395 513 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 CA4P22748 312 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 CES1P23141 567 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 MCM3P25205 808 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 RPL21P46778 160 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 TERF1P54274 439 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 GEMP55040 296 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 SNRPD1P62314 119 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 MESP2Q0VG99 397 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 KCTD19Q17RG1 926 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 ERCC6LQ2NKX8 1250 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 FAXCQ5TGI0 409 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 DUPD1Q68J44 220 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 ANO7Q6IWH7 933 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 SERPINA13PQ6UXR4 307 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 NAXDQ8IW45 347 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 RYBPQ8N488 228 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 CNTD1Q8N815 330 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 KDM1BQ8NB78 822 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 TSEN2Q8NCE0 465 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 CEP76Q8TAP6 659 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 ISG20Q96AZ6 181 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 EXOC2Q96KP1 924 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 FCRL5Q96RD9 977 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 TM6SF2Q9BZW4 377 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 SLC25A51Q9H1U9 297 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 WHRNQ9P202 907 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 LHX3Q9UBR4 397 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 TPX2Q9ULW0 747 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 AAR2Q9Y312 384 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 SNX24Q9Y343 169 aa12.17□□□□□ -0.46
SHKBP1-213ENST00000597325 CEP192Q8TEP8 1941 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ESYT3A0FGR9 886 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ERI2A8K979 691 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SMAPO00193 183 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 DNALI1O14645 258 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 PSMD3O43242 534 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SMAD6O43541 496 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ATP9BO43861 1147 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 BNIP3LO60238 219 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SEC31AO94979 1220 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 METTL18O95568 372 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 CD160O95971 181 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 APRTP07741 180 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ITIH2P19823 946 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 CD68P34810 354 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 EIF2S3P41091 472 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 CD86P42081 329 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SCNN1BP51168 640 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SEC13P55735 322 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 AP1S1P61966 158 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 DSC2Q02487 901 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 CAV1Q03135 178 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 RAD51Q06609 339 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SEMA5AQ13591 1074 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 CUL1Q13616 776 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 HLTFQ14527 1009 aaKnown RBP eCLIP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ZNF234Q14588 700 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 DLG2Q15700 870 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 RALGPS1Q5JS13 557 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 LYSMD4Q5XG99 296 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ALG1LQ6GMV1 187 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 TRMT11Q7Z4G4 463 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SFTPA1Q8IWL2 248 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 PPIL6Q8IXY8 311 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 PGBD5Q8N414 524 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ZNF513Q8N8E2 541 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 FAM181AQ8N9Y4 354 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 OR2AP1Q8NGE2 309 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 RLN3Q8WXF3 142 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 IFT81Q8WYA0 676 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 IMP4Q96G21 291 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ZNF419Q96HQ0 510 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 MRGPRX3Q96LB0 322 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 FSD1LQ9BXM9 530 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 TNKS2Q9H2K2 1166 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 LRRC40Q9H9A6 602 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ETNK1Q9HBU6 452 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 DMGDHQ9UI17 866 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 ANAPC5Q9UJX4 755 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 SHOC2Q9UQ13 582 aa12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-213ENST00000597325 EDDM13A0A1B0GTR0 161 aa12.15□□□□□ -0.46
SHKBP1-213ENST00000597325 MUSKO15146 869 aa12.15□□□□□ -0.46
SHKBP1-213ENST00000597325 INSIG1O15503 277 aa12.15□□□□□ -0.46
SHKBP1-213ENST00000597325 TUBBP07437 444 aa12.15□□□□□ -0.46
SHKBP1-213ENST00000597325 TPSB2P20231 275 aa12.15□□□□□ -0.46
SHKBP1-213ENST00000597325 ITGA8P53708 1063 aa12.15□□□□□ -0.46
SHKBP1-213ENST00000597325 DRG2P55039 364 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-213ENST00000597325 SARNPP82979 210 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms