RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 WSCD2Q2TBF2 565 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 TFDP3Q5H9I0 405 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 TPRG1LQ5T0D9 272 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 KDM7AQ6ZMT4 941 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 CNTD1Q8N815 330 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 KIAA1524Q8TCG1 905 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 PDCD6IPQ8WUM4 868 aaKnown RBP21.19■□□□□ 0.98
PNKP-209ENST00000596726 CDC6Q99741 560 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 DESI2Q9BSY9 194 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 BRD8Q9H0E9 1235 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 HAUS2Q9NVX0 235 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 RAI2Q9Y5P3 530 aa21.19■□□□□ 0.98
PNKP-209ENST00000596726 A0A0U1RQJ8 604 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 GRID2IPA4D2P6 1211 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 TOR1BO14657 336 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 PPP1R12AO14974 1030 aaPredicted RBP21.18■□□□□ 0.98
PNKP-209ENST00000596726 GM2AP17900 193 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 TGM2P21980 687 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 CTNNA2P26232 953 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 YPEL5P62699 121 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 ZBTB17Q13105 803 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 LRRC14Q15048 493 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 IRF4Q15306 451 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 LLGL1Q15334 1064 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 PPP2R5EQ16537 467 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 INAVAQ3KP66 663 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 ARMC12Q5T9G4 340 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 BZW1Q7L1Q6 419 aaKnown RBP21.18■□□□□ 0.98
PNKP-209ENST00000596726 PAF1Q8N7H5 531 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 PIH1D2Q8WWB5 315 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 RBM41Q96IZ5 413 aaKnown RBP21.18■□□□□ 0.98
PNKP-209ENST00000596726 B4GALT6Q9UBX8 382 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 WASF3Q9UPY6 502 aa21.18■□□□□ 0.98
PNKP-209ENST00000596726 LZTS3O60299 673 aaPredicted RBP21.17■□□□□ 0.98
PNKP-209ENST00000596726 PDHA1P08559 390 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 PECAM1P16284 738 aaPredicted RBP21.17■□□□□ 0.98
PNKP-209ENST00000596726 PEX5P50542 639 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 COPS2P61201 443 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 AP1B1Q10567 949 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 KIF5AQ12840 1032 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 KAZNQ674X7 775 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 CBARPQ8N350 705 aaPredicted RBP21.17■□□□□ 0.98
PNKP-209ENST00000596726 TXLNBQ8N3L3 684 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 SCRN2Q96FV2 425 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 MCCC1Q96RQ3 725 aaPredicted RBP21.17■□□□□ 0.98
PNKP-209ENST00000596726 SAE1Q9UBE0 346 aaPredicted RBP21.17■□□□□ 0.98
PNKP-209ENST00000596726 TRIM10Q9UDY6 481 aa21.17■□□□□ 0.98
PNKP-209ENST00000596726 NEBLO76041 1014 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 RECQL5O94762 991 aaPredicted RBP21.16■□□□□ 0.98
PNKP-209ENST00000596726 MMP2P08253 660 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 ELFN1P0C7U0 828 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 NFKBIAP25963 317 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 VIPR1P32241 457 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 SHC2P98077 582 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 PDE1CQ14123 709 aaPredicted RBP21.16■□□□□ 0.98
PNKP-209ENST00000596726 PRKD1Q15139 912 aaPredicted RBP21.16■□□□□ 0.98
PNKP-209ENST00000596726 NT5DC3Q86UY8 548 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 CCDC50Q8IVM0 306 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 SLC25A45Q8N413 288 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 TDRD1Q9BXT4 1180 aaKnown RBP21.16■□□□□ 0.98
PNKP-209ENST00000596726 CAAP1Q9H8G2 361 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 TOR4AQ9NXH8 423 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 TTLL3Q9Y4R7 772 aa21.16■□□□□ 0.98
PNKP-209ENST00000596726 CCDC66A2RUB6 948 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 A8MX80 341 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 DKK1O94907 266 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 HEXIM1O94992 359 aaKnown RBP21.15■□□□□ 0.98
PNKP-209ENST00000596726 PRLP01236 227 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 CSF2P04141 144 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 FTH1P19P0C7X4 201 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 CYP2A6P11509 494 aaPredicted RBP21.15■□□□□ 0.98
PNKP-209ENST00000596726 DGKAP23743 735 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 EIF2B5Q13144 721 aaKnown RBP21.15■□□□□ 0.98
PNKP-209ENST00000596726 CNGA3Q16281 694 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 BBS12Q6ZW61 710 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 B4GALNT4Q76KP1 1039 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 SLCO6A1Q86UG4 719 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 PARGQ86W56 976 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.15■□□□□ 0.98
PNKP-209ENST00000596726 COQ10AQ96MF6 247 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 EFR3BQ9Y2G0 817 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 ADGRG1Q9Y653 693 aa21.15■□□□□ 0.98
PNKP-209ENST00000596726 SPEGQ15772 3267 aa21.14■□□□□ 0.98
PNKP-209ENST00000596726 NPIPB15A6NHN6 443 aaPredicted RBP21.14■□□□□ 0.97
PNKP-209ENST00000596726 TNFSF14O43557 240 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 SDC3O75056 442 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 PIAS2O75928 621 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 NME1P15531 152 aaKnown RBP21.14■□□□□ 0.97
PNKP-209ENST00000596726 LHCGRP22888 699 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 PTPN7P35236 360 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 SKOR1P84550 965 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 PTK2BQ14289 1009 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 PTPRRQ15256 657 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 ZNF542PQ5EBM4 170 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 FAM182AQ5T1J6 154 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 EID2Q8N6I1 236 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 TFB1MQ8WVM0 346 aaKnown RBP21.14■□□□□ 0.97
PNKP-209ENST00000596726 P3H4Q92791 437 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 HERPUD2Q9BSE4 406 aa21.14■□□□□ 0.97
PNKP-209ENST00000596726 CEP41Q9BYV8 373 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms