RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MED19A0JLT2 244 aaPredicted RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 CCDC66A2RUB6 948 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 NPIPB15A6NHN6 443 aaPredicted RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 FZD6O60353 706 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 TM7SF2O76062 418 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 CPP00450 1065 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 TGM2P21980 687 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 LHCGRP22888 699 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 CD68P34810 354 aaPredicted RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 SKOR1P84550 965 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 OTUD4Q01804 1114 aaKnown RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 BNIP3Q12983 259 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 IRF4Q15306 451 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 WSCD2Q2TBF2 565 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 PPM1JQ5JR12 505 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 ALG1LQ6GMV1 187 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 PSAPL1Q6NUJ1 521 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 LIPIQ6XZB0 460 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 DPPA4Q7L190 304 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 KDELC2Q7Z4H8 507 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 PTAR1Q7Z6K3 402 aaPredicted RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 ABI3BPQ7Z7G0 1075 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 PIP4P1Q86T03 277 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 TP53I13Q8NBR0 393 aaPredicted RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 PLA2G15Q8NCC3 412 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 SPATA22Q8NHS9 363 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 ACTL9Q8TC94 416 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 P3H4Q92791 437 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 HES6Q96HZ4 224 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 CALR3Q96L12 384 aaKnown RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 RBM15Q96T37 977 aaKnown RBP eCLIP11.58□□□□□ -0.56
VMP1-211ENST00000591315 PNMA8BQ9ULN7 279 aaPredicted RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 R3HDM2Q9Y2K5 976 aaKnown RBP11.58□□□□□ -0.56
VMP1-211ENST00000591315 PPP2R2CQ9Y2T4 447 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 CHD8Q9HCK8 2581 aa11.58□□□□□ -0.56
VMP1-211ENST00000591315 TPRP12270 2363 aaKnown RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 A0A1B0GTQ1 180 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 SPAARA0A1B0GVQ0 90 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 H7C0C1 242 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 PPP1R12AO14974 1030 aaPredicted RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 SDC3O75056 442 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 SOCS5O75159 536 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 NEBLO76041 1014 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 KCNK5O95279 499 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 CER1O95813 267 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 MT-CYBP00156 380 aaPredicted RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 CCDC175P0C221 793 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 RBL1P28749 1068 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 NUDT1P36639 197 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 ATP5OP48047 213 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 NR2C2P49116 596 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 NOVA1P51513 510 aaKnown RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 ELP6Q0PNE2 266 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 NOMO1Q15155 1222 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 CNGA3Q16281 694 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 ARMC12Q5T9G4 340 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 DENND2CQ68D51 928 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 KCTD16Q68DU8 428 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 ERAP2Q6P179 960 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 HSD11B1LQ7Z5J1 315 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 RNF10Q8N5U6 811 aaKnown RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 TFB1MQ8WVM0 346 aaKnown RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 QKIQ96PU8 341 aaKnown RBP eCLIP11.57□□□□□ -0.56
VMP1-211ENST00000591315 LENG8Q96PV6 779 aaPredicted RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 ELF4Q99607 663 aaPredicted RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 TDRD1Q9BXT4 1180 aaKnown RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 GLOD4Q9HC38 313 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 GDF3Q9NR23 364 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 KLF15Q9UIH9 416 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 TPX2Q9ULW0 747 aaKnown RBP11.57□□□□□ -0.56
VMP1-211ENST00000591315 PHTF1Q9UMS5 762 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 HS3ST3A1Q9Y663 406 aa11.57□□□□□ -0.56
VMP1-211ENST00000591315 AKAP13Q12802 2813 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 APOC4-APOC2K7ER74 178 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 K7ESM1 405 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 SCAMP1O15126 338 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 RECQL5O94762 991 aaPredicted RBP11.56□□□□□ -0.56
VMP1-211ENST00000591315 APOC2P02655 101 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 PIRTP0C851 137 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 NFKB1P19838 968 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 SDHBP21912 280 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 VIPR1P32241 457 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 PTPN7P35236 360 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 HNF1BP35680 557 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 SUOXP51687 545 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 PFN3P60673 137 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 COPS2P61201 443 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 FZD2Q14332 565 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 GALNT3Q14435 633 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 ACOX1Q15067 660 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 PCSK7Q16549 785 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 QPCTQ16769 361 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 TEX44Q53QW1 395 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 SLC45A4Q5BKX6 768 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 RALGPS1Q5JS13 557 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 CCDC181Q5TID7 509 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 CRTC1Q6UUV9 634 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 IL27RAQ6UWB1 636 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms