RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CD52P31358 61 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 C21orf59P57076 290 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 LRRC74AQ0VAA2 488 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 KRT33BQ14525 404 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 PTPRNQ16849 979 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 GALNT15Q8N3T1 639 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC9A7Q96T83 725 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 UNC93B1Q9H1C4 597 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 PTGES3LE9PB15 166 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 ALDH2P05091 517 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 FGF3P11487 239 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 IDO1P14902 403 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC1A2P43004 574 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 TNK2Q07912 1038 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 ZNF618Q5T7W0 954 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 CASP10Q92851 521 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 MLPHQ9BV36 600 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 ZNF7P17097 686 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 GCAP28676 217 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 FAM117BQ6P1L5 589 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 AFTPHQ6ULP2 937 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 KANSL3Q9P2N6 904 aa17.19■□□□□ 0.34
SMARCA4-215ENST00000590574 MATN3O15232 486 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 MLYCDO95822 493 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 ABL2P42684 1182 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 TAS2R39P59534 338 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 VPS26BQ4G0F5 336 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 TMEM174Q8WUU8 243 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 LZICQ8WZA0 190 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 SPATA16Q9BXB7 569 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 BBIP1A8MTZ0 92 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 KCNH1O95259 989 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 T-ENOLP0DO92 83 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 ADSLP30566 484 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 SCNN1AP37088 669 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 THOP1P52888 689 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 TMEM26Q6ZUK4 368 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 OR2T34Q8NGX1 318 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 OR2T3Q8NH03 318 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 UROC1Q96N76 676 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 POLR1BQ9H9Y6 1135 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 CCNFP41002 786 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 PAOXQ6QHF9 649 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 EPGNQ6UW88 154 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 HFE2Q6ZVN8 426 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 MTFMTQ96DP5 389 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 EXOC2Q96KP1 924 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 CDK5RAP1Q96SZ6 601 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 HOPXQ9BPY8 73 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 C5orf58C9J3I9 102 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 C9JVG2 144 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 NPHS1O60500 1241 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 ACBD5Q5T8D3 534 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 CHCHD3Q9NX63 227 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 ATXN10Q9UBB4 475 aa17.18■□□□□ 0.34
SMARCA4-215ENST00000590574 RGS14O43566 566 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 KRT6AP02538 564 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 KRT6BP04259 564 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 KRT6CP48668 564 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 IRGQQ8WZA9 623 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 TXNRD2Q9NNW7 524 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 INVSQ9Y283 1065 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 PGK1P00558 417 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 OR4Q2P0C623 313 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 MZF1P28698 734 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC5A3P53794 718 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 DSC2Q02487 901 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 MAP2K5Q13163 448 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 TRIM25Q14258 630 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 GPRIN3Q6ZVF9 776 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 PATL1Q86TB9 770 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 ATG16L2Q8NAA4 619 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 DGCR6LQ9BY27 220 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SENP6Q9GZR1 1112 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SMPD4Q9NXE4 827 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 ZSCAN9O15535 394 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 XRCC1P18887 633 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SOAT1P35610 550 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 HALP42357 657 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 ACAP2Q15057 778 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 C8orf59Q8N0T1 100 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 TWIST2Q8WVJ9 160 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 MAGED4Q96JG8 741 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 RHOBTB2Q9BYZ6 727 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 LINGO3P0C6S8 592 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 PSMB9P28065 219 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SERPINB1P30740 379 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC10A2Q12908 348 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 DLG1Q12959 904 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SPDYE7PQ495Y7 208 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 GPR107Q5VW38 600 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 CNSTQ6PJW8 725 aa17.17■□□□□ 0.34
SMARCA4-215ENST00000590574 SNAP91O60641 907 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 ZDHHC2Q9UIJ5 367 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 FAM149AA5PLN7 773 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 NEMP2A6NFY4 417 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 PCNAP12004 261 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 MSH3P20585 1137 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 SFT2D3Q587I9 215 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms