RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ERVMER34-1Q9H9K5 563 aa11.32□□□□□ -0.6
SMAD4-211ENST00000590499 FZD3Q9NPG1 666 aa11.32□□□□□ -0.6
SMAD4-211ENST00000590499 GPR27Q9NS67 375 aa11.32□□□□□ -0.6
SMAD4-211ENST00000590499 PCOLCE2Q9UKZ9 415 aa11.32□□□□□ -0.6
SMAD4-211ENST00000590499 TDRD6O60522 2096 aaKnown RBP11.32□□□□□ -0.6
SMAD4-211ENST00000590499 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-211ENST00000590499 GOLGA4Q13439 2230 aaKnown RBP11.32□□□□□ -0.6
SMAD4-211ENST00000590499 EPG5Q9HCE0 2579 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 MAP1BP46821 2468 aaKnown RBP11.31□□□□□ -0.6
SMAD4-211ENST00000590499 SPAARA0A1B0GVQ0 90 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 C3orf70A6NLC5 250 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-211ENST00000590499 TMEM110-MUSTN1A8MSY1 372 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 ZNF487B1APH4 448 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 RAD51BO15315 384 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 DFNA5O60443 496 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 GJC1P36383 396 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 RXRGP48443 463 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 SUOXP51687 545 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 HADHBP55084 474 aaKnown RBP11.31□□□□□ -0.6
SMAD4-211ENST00000590499 GALNT2Q10471 571 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 HNRNPDQ14103 355 aaKnown RBP11.31□□□□□ -0.6
SMAD4-211ENST00000590499 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
SMAD4-211ENST00000590499 SLC45A4Q5BKX6 768 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 ANKRD20A8PQ5CZ79 823 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 LRRC73Q5JTD7 316 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 TMEM214Q6NUQ4 689 aaKnown RBP11.31□□□□□ -0.6
SMAD4-211ENST00000590499 GLRX5Q86SX6 157 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 SRLQ86TD4 932 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 CCDC170Q8IYT3 715 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 PGBD5Q8N414 524 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 ATPAF2Q8N5M1 289 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 PLPP7Q8NBV4 271 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 ASB12Q8WXK4 309 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 RAPGEF5Q92565 580 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 FEM1CQ96JP0 617 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 MYOCQ99972 504 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 CALN1Q9BXU9 219 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 SLC17A9Q9BYT1 436 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 SUV39H2Q9H5I1 410 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 GDF3Q9NR23 364 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 SEPT3Q9UH03 358 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 WASF3Q9UPY6 502 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 BTBD3Q9Y2F9 522 aa11.31□□□□□ -0.6
SMAD4-211ENST00000590499 FREM2Q5SZK8 3169 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 IGLON5A6NGN9 336 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 TRAFD1O14545 582 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-211ENST00000590499 FLRT2O43155 660 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 FURINP09958 794 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 ITIH2P19823 946 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 KDELR1P24390 212 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 AKT2P31751 481 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
SMAD4-211ENST00000590499 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
SMAD4-211ENST00000590499 MAGEA1P43355 309 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 CLDN2P57739 230 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 AP1S1P61966 158 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 SHC2P98077 582 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 STAT4Q14765 748 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 UGP2Q16851 508 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 TMEM52BQ4KMG9 183 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 PRAMEF14Q5SWL7 426 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 LRRC38Q5VT99 294 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 BRAT1Q6PJG6 821 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
SMAD4-211ENST00000590499 KANSL1Q7Z3B3 1105 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 TTC7BQ86TV6 843 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 CAMK1DQ8IU85 385 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 LRRC49Q8IUZ0 686 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 MAP7D3Q8IWC1 876 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 TEX26Q8N6G2 289 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 DENND6BQ8NEG7 585 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 MAML1Q92585 1016 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 FATE1Q969F0 183 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 BMFQ96LC9 184 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 LENG8Q96PV6 779 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-211ENST00000590499 MGME1Q9BQP7 344 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 ATP13A3Q9H7F0 1226 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 HS3ST3A1Q9Y663 406 aa11.3□□□□□ -0.6
SMAD4-211ENST00000590499 IGF2RP11717 2491 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 POM121BA6NF01 834 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 SOWAHDA6NJG2 315 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 NEMP1O14524 444 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 YKT6O15498 198 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 HTRA2O43464 458 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-211ENST00000590499 MAGEC1O60732 1142 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-211ENST00000590499 THEGLP0DJG4 465 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-211ENST00000590499 SERPINA4P29622 427 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 MMP12P39900 470 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 SLC1A1P43005 524 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 RENBPP51606 427 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 SIM1P81133 766 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-211ENST00000590499 IL9RQ01113 521 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 GBE1Q04446 702 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 SLC10A2Q12908 348 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-211ENST00000590499 ZNF235Q14590 738 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms