RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 CMTM6Q9NX76 183 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 PKD2L2Q9NZM6 624 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 VPS51Q9UID3 782 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 SHROOM3Q8TF72 1996 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 EEF2KO00418 725 aaKnown RBP15.84■□□□□ 0.13
MBD1-222ENST00000590208 SYNCRIPO60506 623 aaKnown RBP15.84■□□□□ 0.13
MBD1-222ENST00000590208 GNL1P36915 607 aaPredicted RBP15.84■□□□□ 0.13
MBD1-222ENST00000590208 RPS9P46781 194 aaKnown RBP15.84■□□□□ 0.13
MBD1-222ENST00000590208 SEPT6Q14141 434 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 OXA1LQ15070 435 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 C6orf183Q5T699 404 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 ANKRD13AQ8IZ07 590 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 ABHD11Q8NFV4 315 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 ZC3H15Q8WU90 426 aaKnown RBP15.84■□□□□ 0.13
MBD1-222ENST00000590208 ZUFSPQ96AP4 578 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 MUS81Q96NY9 551 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 CD320Q9NPF0 282 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 TMEM9Q9P0T7 183 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 PSME2Q9UL46 239 aa15.84■□□□□ 0.13
MBD1-222ENST00000590208 IGKV6-21A0A0C4DH24 114 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 A0A0J9YYE9 177 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 A8MU76 341 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 UBFD1O14562 309 aaKnown RBP15.83■□□□□ 0.12
MBD1-222ENST00000590208 ARPC2O15144 300 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 ERCC2P18074 760 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 ATP5F1P24539 256 aaPredicted RBP15.83■□□□□ 0.12
MBD1-222ENST00000590208 HADHAP40939 763 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 APLP1P51693 650 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 POU6F1Q14863 301 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 KIF19Q2TAC6 998 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 OTUD3Q5T2D3 398 aaPredicted RBP15.83■□□□□ 0.12
MBD1-222ENST00000590208 OTUD1Q5VV17 481 aaPredicted RBP15.83■□□□□ 0.12
MBD1-222ENST00000590208 EFCAB12Q6NXP0 572 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 NPWQ8N729 165 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 ARL10Q8N8L6 244 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 MYRFLQ96LU7 910 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 SNX25Q9H3E2 840 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 ATAD3AQ9NVI7 634 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 GIT1Q9Y2X7 761 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 AQP12BA6NM10 295 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 TOR1BO14657 336 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 KDM1AO60341 852 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 CPNE6O95741 557 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 MBL2P11226 248 aaPredicted RBP15.83■□□□□ 0.12
MBD1-222ENST00000590208 CAPN3P20807 821 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 AXLP30530 894 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 RCVRNP35243 200 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 TMBIM6P55061 237 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 BACE1P56817 501 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 SPCS2Q15005 226 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 FAM83EQ2M2I3 478 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 PYCR3Q53H96 274 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 CCNYL2Q5T2Q4 361 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 TMTC4Q5T4D3 741 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 XAF1Q6GPH4 301 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 OTOP3Q7RTS5 596 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 ZDHHC17Q8IUH5 632 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 AQP12AQ8IXF9 295 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 MRPL57Q9BQC6 102 aaKnown RBP15.83■□□□□ 0.12
MBD1-222ENST00000590208 CDHR5Q9HBB8 845 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 PCDH12Q9NPG4 1184 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 SLC2A6Q9UGQ3 507 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 ITGB1BP2Q9UKP3 347 aa15.83■□□□□ 0.12
MBD1-222ENST00000590208 A8MT66 165 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 DCLK1O15075 740 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 BDNFP23560 247 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 ATP6V0D1P61421 351 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 IGBP1P78318 339 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 PIGFQ07326 219 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 AQP6Q13520 282 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 FRG1Q14331 258 aaKnown RBP15.82■□□□□ 0.12
MBD1-222ENST00000590208 PAFAH1B3Q15102 231 aaKnown RBP15.82■□□□□ 0.12
MBD1-222ENST00000590208 ESRP1Q6NXG1 681 aaKnown RBP15.82■□□□□ 0.12
MBD1-222ENST00000590208 LARP4Q71RC2 724 aaKnown RBP eCLIP15.82■□□□□ 0.12
MBD1-222ENST00000590208 STRADAQ7RTN6 431 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 TRPV3Q8NET8 790 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 KIF12Q96FN5 646 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 TEPSINQ96N21 525 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 MPHOSPH6Q99547 160 aaKnown RBP15.82■□□□□ 0.12
MBD1-222ENST00000590208 ASB7Q9H672 318 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 TRAF6Q9Y4K3 522 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 RAD54BQ9Y620 910 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 FXYD1O00168 92 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 KPNA4O00629 521 aaPredicted RBP15.82■□□□□ 0.12
MBD1-222ENST00000590208 SEC14L2O76054 403 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 EGFRP00533 1210 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 PABPC1P11940 636 aaKnown RBP15.82■□□□□ 0.12
MBD1-222ENST00000590208 GPX3P22352 226 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 MATKP42679 507 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 NPY2RP49146 381 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 IFITM3Q01628 133 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 DNASE1L3Q13609 305 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 RBM20Q5T481 1227 aaKnown RBP15.82■□□□□ 0.12
MBD1-222ENST00000590208 SYPL2Q5VXT5 272 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 HACD2Q6Y1H2 254 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 CCDC80Q76M96 950 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 COLGALT2Q8IYK4 626 aa15.82■□□□□ 0.12
MBD1-222ENST00000590208 SMG8Q8ND04 991 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms