RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TBC1D3LB9A6J9 549 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 AP3B1O00203 1094 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 AREL1O15033 823 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 TSPAN6O43657 245 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 PCDH8O95206 1070 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 TRBC1P01850 177 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 ALPIP09923 528 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 ATXN1LP0C7T5 689 aaKnown RBP13.68□□□□□ -0.22
VMP1-210ENST00000589823 TBC1D3HP0C7X1 549 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 VIPR1P32241 457 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 ACSL1P33121 698 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 MMP12P39900 470 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 MAGEA6P43360 314 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 CHRNA4P43681 627 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 TAS2R38P59533 333 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 CDH17Q12864 832 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 OLIG2Q13516 323 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 ARHGEF7Q14155 803 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 KCNJ11Q14654 390 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 TBC1D3GQ6DHY5 549 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 TBC1D3CQ6IPX1 549 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 DPPA4Q7L190 304 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 C11orf74Q86VG3 221 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 TBC1D3Q8IZP1 549 aaPredicted RBP13.68□□□□□ -0.22
VMP1-210ENST00000589823 FAM160A2Q8N612 972 aaPredicted RBP13.68□□□□□ -0.22
VMP1-210ENST00000589823 BBOF1Q8ND07 529 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 OR2T34Q8NGX1 318 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 CXorf40AQ8TE69 158 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 SNF8Q96H20 258 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 MCCC1Q96RQ3 725 aaPredicted RBP13.68□□□□□ -0.22
VMP1-210ENST00000589823 ARNT2Q9HBZ2 717 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 B4GALT6Q9UBX8 382 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 ITM2BQ9Y287 266 aa13.68□□□□□ -0.22
VMP1-210ENST00000589823 CACNA1IQ9P0X4 2223 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 PRR23AA6NEV1 266 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 A8MX80 341 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 SMAPO00193 183 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 RPP40O75818 363 aaKnown RBP13.67□□□□□ -0.22
VMP1-210ENST00000589823 HEXIM1O94992 359 aaKnown RBP13.67□□□□□ -0.22
VMP1-210ENST00000589823 ITIH2P19823 946 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 CNR2P34972 360 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 HNF1BP35680 557 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 CALCOCO2Q13137 446 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 TMEM52BQ4KMG9 183 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 RNASEH2BQ5TBB1 312 aaKnown RBP13.67□□□□□ -0.22
VMP1-210ENST00000589823 NEK5Q6P3R8 708 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 HOOK3Q86VS8 718 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 OR52K1Q8NGK4 314 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 GAB3Q8WWW8 586 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 NELL1Q92832 810 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 WRAP53Q9BUR4 548 aaKnown RBP13.67□□□□□ -0.22
VMP1-210ENST00000589823 GPR174Q9BXC1 333 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 MAGEE1Q9HCI5 957 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 HACD3Q9P035 362 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 SNX24Q9Y343 169 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 PCDHGA2Q9Y5H1 932 aa13.67□□□□□ -0.22
VMP1-210ENST00000589823 TCRBV7S3A2A0A539 114 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 NPIPB15A6NHN6 443 aaPredicted RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 H0Y858 1186 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 SPINT1O43278 529 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 RNGTTO60942 597 aaKnown RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 SEC31AO94979 1220 aaKnown RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 SLU7O95391 586 aaKnown RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 ELFN1P0C7U0 828 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 PIRTP0C851 137 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 ZNF30P17039 623 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 IVDP26440 423 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 RPS21P63220 83 aaKnown RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 SLC7A5Q01650 507 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 SEMG2Q02383 582 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 RPL6Q02878 288 aaKnown RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 MORF4L2Q15014 288 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 ANKRD22Q5VYY1 191 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 DUPD1Q68J44 220 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 DENND5AQ6IQ26 1287 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 KIAA1161Q6NSJ0 714 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 CRTC1Q6UUV9 634 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 CEP68Q76N32 757 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 FRMD1Q8N878 549 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 NAT8LQ8N9F0 302 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 MCUQ8NE86 351 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 BLOC1S5Q8TDH9 187 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 LYSMD1Q96S90 227 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 GPR63Q9BZJ6 419 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 TRABDQ9H4I3 376 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 CASS4Q9NQ75 786 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 MBD1Q9UIS9 605 aaPredicted RBP13.66□□□□□ -0.22
VMP1-210ENST00000589823 GGT7Q9UJ14 662 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 ANAPC5Q9UJX4 755 aa13.66□□□□□ -0.22
VMP1-210ENST00000589823 C1orf232A0A0U1RR37 186 aa13.65□□□□□ -0.22
VMP1-210ENST00000589823 A0A1W2PQU0 124 aa13.65□□□□□ -0.22
VMP1-210ENST00000589823 GOLGA8MH3BSY2 632 aa13.65□□□□□ -0.22
VMP1-210ENST00000589823 MMP20O60882 483 aa13.65□□□□□ -0.22
VMP1-210ENST00000589823 TMEM63AO94886 807 aa13.65□□□□□ -0.22
VMP1-210ENST00000589823 FSBPO95073 299 aa13.65□□□□□ -0.22
VMP1-210ENST00000589823 BCKDHBP21953 392 aa13.65□□□□□ -0.22
VMP1-210ENST00000589823 GRIA1P42261 906 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms