RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TRIM11Q96F44 468 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 PDXPQ96GD0 296 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 FCRL3Q96P31 734 aaPredicted RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 LGMNQ99538 433 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 CCDC3Q9BQI4 270 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.42□□□□□ -0.1
VMP1-206ENST00000587945 SYNDIG1Q9H7V2 258 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 MRPL47Q9HD33 250 aaKnown RBP14.42□□□□□ -0.1
VMP1-206ENST00000587945 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.42□□□□□ -0.1
VMP1-206ENST00000587945 KLQ9UEF7 1012 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 SEPT3Q9UH03 358 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 SATB2Q9UPW6 733 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 ENTPD2Q9Y5L3 495 aa14.42□□□□□ -0.1
VMP1-206ENST00000587945 ELFN1P0C7U0 828 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 RARAP10276 462 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 GM2AP17900 193 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 FANCCQ00597 558 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 MTM1Q13496 603 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 ACAP1Q15027 740 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 AGERQ15109 404 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 ELOCQ15369 112 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 DPYSL2Q16555 572 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 TMCO4Q5TGY1 634 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 POLNQ7Z5Q5 900 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 LUZP1Q86V48 1076 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 PELI3Q8N2H9 469 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 FSTL5Q8N475 847 aaPredicted RBP14.41□□□□□ -0.1
VMP1-206ENST00000587945 LZTR1Q8N653 840 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 TPCN2Q8NHX9 752 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 OR1E3Q8WZA6 343 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 NAT6Q93015 286 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 FUBP1Q96AE4 644 aaKnown RBP14.41□□□□□ -0.1
VMP1-206ENST00000587945 HIC2Q96JB3 615 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 WDR92Q96MX6 357 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 ZNF578Q96N58 590 aaPredicted RBP14.41□□□□□ -0.1
VMP1-206ENST00000587945 CSPG4P5Q96PW8 444 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 PSKH2Q96QS6 385 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 THAP2Q9H0W7 228 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 CBX8Q9HC52 389 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 ASCL3Q9NQ33 180 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 MRPL40Q9NQ50 206 aaKnown RBP14.41□□□□□ -0.1
VMP1-206ENST00000587945 RABGEF1Q9UJ41 708 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 GPR34Q9UPC5 381 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 PCDHGC4Q9Y5F7 938 aa14.41□□□□□ -0.1
VMP1-206ENST00000587945 IGSF10Q6WRI0 2623 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 SYCE3A1L190 88 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 CFAP69A5D8W1 941 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 TMEM202A6NGA9 273 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 EIF4E1BA6NMX2 242 aaKnown RBP14.4□□□□□ -0.1
VMP1-206ENST00000587945 DXOO77932 396 aaKnown RBP14.4□□□□□ -0.1
VMP1-206ENST00000587945 PEX11BO96011 259 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 TNFP01375 233 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 PRB1P04280 392 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 ALPIP09923 528 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 ARL4AP40617 200 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 RENBPP51606 427 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 ZNF135P52742 658 aaPredicted RBP14.4□□□□□ -0.1
VMP1-206ENST00000587945 PDX1P52945 283 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 PCBP4P57723 403 aaKnown RBP14.4□□□□□ -0.1
VMP1-206ENST00000587945 AP1S1P61966 158 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 ZNF235Q14590 738 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 ACOX1Q15067 660 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 BOLA3Q53S33 107 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 FIGNQ5HY92 759 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 FOXR1Q6PIV2 292 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 TMCO3Q6UWJ1 677 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 DPPA4Q7L190 304 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 LSMEM2Q8N112 164 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 PGBD5Q8N414 524 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 ARL10Q8N8L6 244 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 ZNF248Q8NDW4 579 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 PDCD6IPQ8WUM4 868 aaKnown RBP14.4□□□□□ -0.1
VMP1-206ENST00000587945 CPLX3Q8WVH0 158 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 SCG3Q8WXD2 468 aaKnown RBP14.4□□□□□ -0.1
VMP1-206ENST00000587945 CCDC74AQ96AQ1 378 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 NOD2Q9HC29 1040 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 FGF22Q9HCT0 170 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 B4GALT6Q9UBX8 382 aa14.4□□□□□ -0.1
VMP1-206ENST00000587945 CACNB4O00305 520 aaPredicted RBP14.39□□□□□ -0.11
VMP1-206ENST00000587945 MAFKO60675 156 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 PBX1P40424 430 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 ERVPABLB-1P60509 514 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 MAXP61244 160 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 POLR2LP62875 67 aaKnown RBP14.39□□□□□ -0.11
VMP1-206ENST00000587945 CXADRP78310 365 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 PTPRRQ15256 657 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 LVRNQ6Q4G3 990 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 GKN2Q86XP6 184 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 SFTPA2Q8IWL1 248 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 OR56A4Q8NGH8 313 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 PRR11Q96HE9 360 aaPredicted RBP14.39□□□□□ -0.11
VMP1-206ENST00000587945 ZNF599Q96NL3 588 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 UBL7Q96S82 380 aaPredicted RBP14.39□□□□□ -0.11
VMP1-206ENST00000587945 RBM15Q96T37 977 aaKnown RBP eCLIP14.39□□□□□ -0.11
VMP1-206ENST00000587945 LGR4Q9BXB1 951 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 PCDH18Q9HCL0 1135 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 ANAPC7Q9UJX3 599 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 MYLKQ15746 1914 aa14.39□□□□□ -0.11
VMP1-206ENST00000587945 FASNP49327 2511 aaKnown RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 A0A087X0T9 212 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms