RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 TCRBV3S1A0A5B6 114 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 ARHGAP10A1A4S6 786 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TRPA1O75762 1119 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 CSPG5O95196 566 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC7A1P30825 629 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 CLCN5P51795 746 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TXNL4AP83876 142 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC14A2Q15849 920 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TMEM259Q4ZIN3 620 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC22A9Q8IVM8 553 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 SCAMP5Q8TAC9 235 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 PAAF1Q9BRP4 392 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 OSBPL11Q9BXB4 747 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 ARHGAP39Q9C0H5 1083 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 UPF3AQ9H1J1 476 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 ARNT2Q9HBZ2 717 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TBC1D13Q9NVG8 400 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 HACD3Q9P035 362 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TMEM181Q9P2C4 612 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 RNF11Q9Y3C5 154 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TRAF6Q9Y4K3 522 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TLL2Q9Y6L7 1015 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 MYLKQ15746 1914 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 NRP2O60462 931 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 PENKP01210 267 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 CCR1P32246 355 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 WNT3AP56704 352 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 MGAT3Q09327 533 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 PCSK7Q16549 785 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 AFMIDQ63HM1 303 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 FAM45BPQ6NSW5 357 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 C8orf82Q6P1X6 216 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 SERINC5Q86VE9 423 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 HERC6Q8IVU3 1022 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 FAM45AQ8TCE6 357 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 TSPAN17Q96FV3 270 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 UHRF1Q96T88 793 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 ACBD6Q9BR61 282 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 SNX13Q9Y5W8 968 aa16.94■□□□□ 0.3
PRKCSH-205ENST00000587327 ARL5CA6NH57 179 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 CASTOR2A6NHX0 329 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 UBFD1O14562 309 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 MRASO14807 208 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 IMPDH1P20839 514 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 SCNN1GP51170 649 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 UPP1Q16831 310 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 EML3Q32P44 896 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 NOMO2Q5JPE7 1267 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 SAMD4BQ5PRF9 694 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 C6orf10Q5SRN2 563 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 CYHR1Q6ZMK1 362 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 AGMOQ6ZNB7 445 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 AMIGO2Q86SJ2 522 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 B4GALNT2Q8NHY0 566 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 GABPB2Q8TAK5 448 aaPredicted RBP16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 ANKRD49Q8WVL7 239 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 GSTO2Q9H4Y5 243 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 AGO3Q9H9G7 860 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 IPO11Q9UI26 975 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 TMCO1Q9UM00 188 aa16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 MRPL42Q9Y6G3 142 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-205ENST00000587327 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 RPL9P32969 192 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 ACADVLP49748 655 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 LRRC23Q53EV4 343 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 HECTD2Q5U5R9 776 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 KDELC1Q6UW63 502 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 CYP2R1Q6VVX0 501 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 HACD2Q6Y1H2 254 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 LARP4Q71RC2 724 aaKnown RBP eCLIP16.92■□□□□ 0.33e-12■■□□□ 12.3
PRKCSH-205ENST00000587327 CARM1Q86X55 608 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 LRRC49Q8IUZ0 686 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 TSPAN14Q8NG11 270 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 DNAJC1Q96KC8 554 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 RANBP9Q96S59 729 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 TRMOQ9BU70 441 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 ABCC13Q9NSE7 274 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 TMLHEQ9NVH6 421 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 SFMBT1Q9UHJ3 866 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 CROTQ9UKG9 612 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 VWA7Q9Y334 891 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 MSI1O43347 362 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 TMCC1O94876 653 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 YWHAQP27348 245 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 CYTH1Q15438 398 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 MTX3Q5HYI7 312 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 CILP2Q8IUL8 1156 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 SNX31Q8N9S9 440 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 OR9I1Q8NGQ6 314 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 OR13J1Q8NGT2 312 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 PBXIP1Q96AQ6 731 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC29A1Q99808 456 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 HAUS8Q9BT25 410 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 EFHD1Q9BUP0 239 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC25A51Q9H1U9 297 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 NOL11Q9H8H0 719 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 ATP13A1Q9HD20 1204 aa16.92■□□□□ 0.3
PRKCSH-205ENST00000587327 DDX18Q9NVP1 670 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms