RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 DNM1LO00429 736 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 KHDRBS3O75525 346 aaKnown RBP13.1□□□□□ -0.31
RNF43-208ENST00000584437 C18orf25Q96B23 403 aaPredicted RBP13.1□□□□□ -0.31
RNF43-208ENST00000584437 VMP1Q96GC9 406 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 OR52E6Q96RD3 313 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 SLC39A8Q9C0K1 460 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 ZFP14Q9HCL3 533 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 LSM1O15116 133 aaKnown RBP13.1□□□□□ -0.31
RNF43-208ENST00000584437 OR10H3O60404 316 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 SERPINB7O75635 380 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 FESP07332 822 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 BMP7P18075 431 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 TPSB2P20231 275 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 BIKQ13323 160 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 TPSAB1Q15661 275 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
RNF43-208ENST00000584437 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 ZBTB46Q86UZ6 589 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 ZNF557Q8N988 423 aaPredicted RBP13.1□□□□□ -0.31
RNF43-208ENST00000584437 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 SLC9A7Q96T83 725 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 PFDN2Q9UHV9 154 aa13.1□□□□□ -0.31
RNF43-208ENST00000584437 TDRKHQ9Y2W6 561 aaKnown RBP13.1□□□□□ -0.31
RNF43-208ENST00000584437 CLDN25C9JDP6 229 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 QSOX1O00391 747 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 DNAJA2O60884 412 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
RNF43-208ENST00000584437 FAUP35544 74 aaKnown RBP13.09□□□□□ -0.31
RNF43-208ENST00000584437 GTF2A2P52657 109 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ZACNQ401N2 412 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 HLA-DQA1Q5Y7H0 255 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 FAM92BQ6ZTR7 304 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TMEM161BQ8NDZ6 487 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 HTRA1Q92743 480 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 IFT80Q9P2H3 777 aaPredicted RBP13.09□□□□□ -0.31
RNF43-208ENST00000584437 ZNF180Q9UJW8 692 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
RNF43-208ENST00000584437 SIN3BO75182 1162 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 GPIP06744 558 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 NUMBP49757 651 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 AIF1P55008 147 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TGFB2P61812 414 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ITGA7Q13683 1181 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 GALNT3Q14435 633 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 PTPRNQ16849 979 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ADGRD1Q6QNK2 874 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 KLHL24Q6TFL4 600 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TDRPQ86YL5 185 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 GALNT15Q8N3T1 639 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 CPSF7Q8N684 471 aaKnown RBP13.09□□□□□ -0.31
RNF43-208ENST00000584437 ANKRD52Q8NB46 1076 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ATP6AP2A0A1C7CYW4 349 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TFECO14948 347 aaPredicted RBP13.09□□□□□ -0.31
RNF43-208ENST00000584437 ATP6AP2O75787 350 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 FGRP09769 529 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 LINC00032P0C843 101 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ZNF24P17028 368 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TUBA4AP68366 448 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 MTAPQ13126 283 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ADGRE2Q9UHX3 823 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 VWA7Q9Y334 891 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 SPATA31A1Q5TZJ5 1347 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 PLD1Q13393 1074 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TIGD2Q4W5G0 525 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ERICH5Q6P6B1 374 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 GRPEL2Q8TAA5 225 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 PIH1D2Q8WWB5 315 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 FNDC11Q9BVV2 318 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 ASB8Q9H765 288 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
RNF43-208ENST00000584437 TMEM150BA6NC51 233 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 FFAR3O14843 346 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 GPR42O15529 346 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 RPL7AP62424 266 aaKnown RBP13.08□□□□□ -0.31
RNF43-208ENST00000584437 NOMO1Q15155 1222 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 AKIRIN2Q53H80 203 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 C12orf56Q8IXR9 622 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.31
RNF43-208ENST00000584437 SPATC1LQ9H0A9 340 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 CXorf21Q9HAI6 301 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 ERVK-5Q9HDB9 667 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 ST3GAL5Q9UNP4 418 aa13.08□□□□□ -0.31
RNF43-208ENST00000584437 ZC3H13Q5T200 1668 aaKnown RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 DHX15O43143 795 aaKnown RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 THRBP10828 461 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 SDC2P34741 201 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 ELP6Q0PNE2 266 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
RNF43-208ENST00000584437 ZBTB11O95625 1053 aaPredicted RBP13.08□□□□□ -0.32
RNF43-208ENST00000584437 OMPP47874 163 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms