RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 LRRN4Q8WUT4 740 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 MAML1Q92585 1016 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 RNF25Q96BH1 459 aaPredicted RBP20.52■□□□□ 0.88
SS18-224ENST00000584083 PANX2Q96RD6 677 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 POLR1EQ9GZS1 481 aaKnown RBP20.52■□□□□ 0.88
SS18-224ENST00000584083 RBM22Q9NW64 420 aaKnown RBP eCLIP20.52■□□□□ 0.88
SS18-224ENST00000584083 DDX56Q9NY93 547 aaKnown RBP20.52■□□□□ 0.88
SS18-224ENST00000584083 DTLQ9NZJ0 730 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 B4GALT6Q9UBX8 382 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 KLF15Q9UIH9 416 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 PHTF1Q9UMS5 762 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 PCDHA13Q9Y5I0 950 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 HEY1Q9Y5J3 304 aa20.52■□□□□ 0.88
SS18-224ENST00000584083 ZNF487B1APH4 448 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 SCAMP1O15126 338 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 RECQL5O94762 991 aaPredicted RBP20.51■□□□□ 0.87
SS18-224ENST00000584083 LCA5LO95447 670 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 PCCBP05166 539 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 C1SP09871 688 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 CCNB1P14635 433 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 INPP5AQ14642 412 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 ACOX1Q15067 660 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 AGERQ15109 404 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 PROX2Q3B8N5 592 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 ARMC12Q5T9G4 340 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 FAXCQ5TGI0 409 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 CCNI2Q6ZMN8 369 aaPredicted RBP20.51■□□□□ 0.87
SS18-224ENST00000584083 MACC1Q6ZN28 852 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 RFX6Q8HWS3 928 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 ZNF548Q8NEK5 533 aaPredicted RBP20.51■□□□□ 0.87
SS18-224ENST00000584083 LMX1AQ8TE12 382 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 BTN2A2Q8WVV5 523 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 FATE1Q969F0 183 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 TMEM121BQ9BXQ6 578 aaPredicted RBP20.51■□□□□ 0.87
SS18-224ENST00000584083 NLGN3Q9NZ94 848 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 RAI2Q9Y5P3 530 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 FRYQ5TBA9 3013 aa20.51■□□□□ 0.87
SS18-224ENST00000584083 C3orf70A6NLC5 250 aaPredicted RBP20.5■□□□□ 0.87
SS18-224ENST00000584083 APOL1O14791 398 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 PGLSO95336 258 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 CDK4P11802 303 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 HTR1BP28222 390 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 VIPR1P32241 457 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 PEX5P50542 639 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 DSC2Q02487 901 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 VSIG1Q86XK7 387 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 CCDC13Q8IYE1 715 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 PHACTR4Q8IZ21 702 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 RBFAQ8N0V3 343 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 SPOCK2Q92563 424 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 HDAC11Q96DB2 347 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 APOOQ9BUR5 198 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 SLC13A1Q9BZW2 595 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 SPASTQ9UBP0 616 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 APOBEC3BQ9UH17 382 aaKnown RBP20.5■□□□□ 0.87
SS18-224ENST00000584083 TFR2Q9UP52 801 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 OR1A2Q9Y585 309 aa20.5■□□□□ 0.87
SS18-224ENST00000584083 FAM149AA5PLN7 773 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 K7ESM1 405 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 AQP9O43315 295 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 IPO7O95373 1038 aaKnown RBP20.49■□□□□ 0.87
SS18-224ENST00000584083 GIMD1P0DJR0 217 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 CYP2A6P11509 494 aaPredicted RBP20.49■□□□□ 0.87
SS18-224ENST00000584083 ZFXP17010 805 aaPredicted RBP20.49■□□□□ 0.87
SS18-224ENST00000584083 CES1P23141 567 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 HADHBP55084 474 aaKnown RBP20.49■□□□□ 0.87
SS18-224ENST00000584083 PPARDQ03181 441 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 MTM1Q13496 603 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 SMAD1Q15797 465 aaKnown RBP20.49■□□□□ 0.87
SS18-224ENST00000584083 PRRT3Q5FWE3 981 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 DENND2CQ68D51 928 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 MARCH9Q86YJ5 346 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 TMTC1Q8IUR5 882 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 NDUFAF2Q8N183 169 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 PLD5Q8N7P1 536 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 LGMNQ99538 433 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 DUSP23Q9BVJ7 150 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 TCEAL2Q9H3H9 227 aaPredicted RBP20.49■□□□□ 0.87
SS18-224ENST00000584083 AMACRQ9UHK6 382 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 ALG6Q9Y672 507 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 EPN1Q9Y6I3 576 aaPredicted RBP20.49■□□□□ 0.87
SS18-224ENST00000584083 CSNK1G3Q9Y6M4 447 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 KNTC1P50748 2209 aa20.49■□□□□ 0.87
SS18-224ENST00000584083 EPG5Q9HCE0 2579 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 TMEM8BA6NDV4 472 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 SOWAHDA6NJG2 315 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 JCHAINP01591 159 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 KRT10P13645 584 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 CTPS1P17812 591 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 ACP1P24666 158 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 DYNLT1P63172 113 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 ILKQ13418 452 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 C1orf61Q13536 156 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 NFATC4Q14934 902 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 CNGA3Q16281 694 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 SLC9A4Q6AI14 798 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 ENPP7Q6UWV6 458 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 USP45Q70EL2 814 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 HID1Q8IV36 788 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 PLA2G15Q8NCC3 412 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms