RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SETSIPP0DME0 302 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 TACR2P21452 398 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 CXCR5P32302 372 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 GPD2P43304 727 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 BST2Q10589 180 aaKnown RBP11.61□□□□□ -0.55
NUP85-224ENST00000583948 MAMLD1Q13495 774 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 TUBB2AQ13885 445 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 C16orf72Q14CZ0 275 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
NUP85-224ENST00000583948 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 FAM46CQ5VWP2 391 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 SYPL2Q5VXT5 272 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 NUGGCQ68CJ6 796 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 PMF1Q6P1K2 205 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 MSANTD2Q6P1R3 559 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 DCUN1D2Q6PH85 259 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 LINGO4Q6UY18 593 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 SLFN11Q7Z7L1 901 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 NT5DC3Q86UY8 548 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 PARGQ86W56 976 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 CHSY1Q86X52 802 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 SIX6OS1Q8N1H7 587 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 DQX1Q8TE96 717 aaKnown RBP11.61□□□□□ -0.55
NUP85-224ENST00000583948 GRAMD1AQ96CP6 724 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 C18orf8Q96DM3 657 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 ABHD17AQ96GS6 310 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 MCEEQ96PE7 176 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 OSBPL9Q96SU4 736 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 KLF6Q99612 283 aaPredicted RBP11.61□□□□□ -0.55
NUP85-224ENST00000583948 TUBB2BQ9BVA1 445 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 CARD6Q9BX69 1037 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 TLR10Q9BXR5 811 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 SLC17A9Q9BYT1 436 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 UBXN6Q9BZV1 441 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 TRIM7Q9C029 511 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 L2HGDHQ9H9P8 463 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 SEPT10Q9P0V9 454 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 APOBEC3BQ9UH17 382 aaKnown RBP11.61□□□□□ -0.55
NUP85-224ENST00000583948 ACTL7AQ9Y615 435 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 CSNK1G3Q9Y6M4 447 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 ADGRG4Q8IZF6 3080 aa11.61□□□□□ -0.55
NUP85-224ENST00000583948 TNRC6AQ8NDV7 1962 aaKnown RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 IGLON5A6NGN9 336 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 E5RJQ4 531 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 C1QTNF3-AMACRE9PGA6 284 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 ZNF185O15231 689 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 ATP9BO43861 1147 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 TCP1P17987 556 aaKnown RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 COMTP21964 271 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 CHRNA3P32297 505 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 NUDT1P36639 197 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 DCTP40126 519 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 SLC8A3P57103 927 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 WHAMMP3Q1A5X7 153 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 LRRC73Q5JTD7 316 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 KYAT3Q6YP21 454 aaKnown RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 TAC4Q86UU9 113 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 XYLT1Q86Y38 959 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 UNC45BQ8IWX7 931 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 PHACTR4Q8IZ21 702 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 UNC5BQ8IZJ1 945 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 C3orf20Q8ND61 904 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 RCBTB1Q8NDN9 531 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 OR2A12Q8NGT7 310 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 PCDH19Q8TAB3 1148 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 C9orf43Q8TAL5 461 aaPredicted RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 NKD1Q969G9 470 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 FUBP1Q96AE4 644 aaKnown RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 SLC39A13Q96H72 371 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 ADNPQ9H2P0 1102 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 LRRN3Q9H3W5 708 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 METTL5Q9NRN9 209 aaKnown RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 TMPRSS4Q9NRS4 437 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 EVA1BQ9NVM1 165 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 ANAPC2Q9UJX6 822 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 TPX2Q9ULW0 747 aaKnown RBP11.6□□□□□ -0.55
NUP85-224ENST00000583948 RNF215Q9Y6U7 377 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 ZFHX3Q15911 3703 aa11.6□□□□□ -0.55
NUP85-224ENST00000583948 H3BM21 787 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 MYO1FO00160 1098 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 CLDN1O95832 211 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 LTFP02788 710 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 ANXA6P08133 673 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 SRCP12931 536 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 ITIH2P19823 946 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 TNFRSF8P28908 595 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 GKP32189 559 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 NOS2P35228 1153 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 NNMTP40261 264 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 SSR1P43307 286 aaKnown RBP11.59□□□□□ -0.55
NUP85-224ENST00000583948 SNX16P57768 344 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 CKAP4Q07065 602 aaKnown RBP11.59□□□□□ -0.55
NUP85-224ENST00000583948 PHF19Q5T6S3 580 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 FAM102AQ5T9C2 384 aaPredicted RBP11.59□□□□□ -0.55
NUP85-224ENST00000583948 FAXCQ5TGI0 409 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 CCDC181Q5TID7 509 aa11.59□□□□□ -0.55
NUP85-224ENST00000583948 FAM183BPQ6ZVS7 135 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms