RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 JAMLQ86YT9 394 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 ZDHHC17Q8IUH5 632 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 HSCBQ8IWL3 235 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 FMR1NBQ8N0W7 255 aaPredicted RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 SDR16C5Q8N3Y7 309 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 FSTL5Q8N475 847 aaPredicted RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 ARL10Q8N8L6 244 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 ZNF397Q8NF99 534 aaPredicted RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 OR7D4Q8NG98 312 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 OR6C4Q8NGE1 309 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 SMARCE1Q969G3 411 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 NT5C3BQ969T7 300 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 VOPP1Q96AW1 172 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 ISG20Q96AZ6 181 aaKnown RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 TMEM159Q96B96 161 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 ARHGEF26Q96DR7 871 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 MRRFQ96E11 262 aaKnown RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 PGAP3Q96FM1 320 aaPredicted RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 FAM81BQ96LP2 452 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 TMEM74Q96NL1 305 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 GFM1Q96RP9 751 aaKnown RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 HAPLN3Q96S86 360 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 LRRC61Q9BV99 259 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 FOXP3Q9BZS1 431 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 STRADBQ9C0K7 418 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 INTS2Q9H0H0 1204 aaKnown RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 SLC25A18Q9H1K4 315 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 LRRN3Q9H3W5 708 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 ZDHHC6Q9H6R6 413 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 SYNDIG1Q9H7V2 258 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 EPB41L5Q9HCM4 733 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 ATP13A1Q9HD20 1204 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 GEMIN8Q9NWZ8 242 aaKnown RBP5.4□□□□□ -1.54
VAPA-207ENST00000583879 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.4□□□□□ -1.54
VAPA-207ENST00000583879 ZNF212Q9UDV6 495 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.4□□□□□ -1.54
VAPA-207ENST00000583879 ATP6V1DQ9Y5K8 247 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 SNX10Q9Y5X0 201 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 ACTL7AQ9Y615 435 aa5.4□□□□□ -1.54
VAPA-207ENST00000583879 CFAP46Q8IYW2 2715 aa5.4□□□□□ -1.55
VAPA-207ENST00000583879 ARID1BQ8NFD5 2236 aaPredicted RBP5.4□□□□□ -1.55
VAPA-207ENST00000583879 A0A1W2PQC6 194 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 TMEM110-MUSTN1A8MSY1 372 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 D6RAR5 112 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 AREL1O15033 823 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 MMP20O60882 483 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 PPFIA2O75334 1257 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 DAB1O75553 588 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 TM7SF2O76062 418 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 GNA14O95837 355 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 ERBB2P04626 1255 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 RPLP0P05388 317 aaKnown RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 ALPIP09923 528 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 HGFP14210 728 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 GLB1P16278 677 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 TFE3P19532 575 aaPredicted RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 GKP32189 559 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 KRT9P35527 623 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 IGFALSP35858 605 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 USP8P40818 1118 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 SNRPD1P62314 119 aaKnown RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 CYP4F2P78329 520 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 TLE1Q04724 770 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 MORC3Q14149 939 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 CLCA4Q14CN2 919 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 ARHGAP44Q17R89 818 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 SWI5Q1ZZU3 235 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 MYLK3Q32MK0 819 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 SLC25A52Q3SY17 297 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 MANEAQ5SRI9 462 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 OTUD1Q5VV17 481 aaPredicted RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 TTI2Q6NXR4 508 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 FOXR2Q6PJQ5 311 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 OGFOD3Q6PK18 319 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 ENPP7Q6UWV6 458 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 GDPD4Q6W3E5 623 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 MACC1Q6ZN28 852 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 VPS36Q86VN1 386 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 ZFAND4Q86XD8 727 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 GKN2Q86XP6 184 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 DTX1Q86Y01 620 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 HID1Q8IV36 788 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 PASD1Q8IV76 773 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 TRIM59Q8IWR1 403 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 RYBPQ8N488 228 aaPredicted RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 TP53I13Q8NBR0 393 aaPredicted RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 C1orf131Q8NDD1 294 aaKnown RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 GPR156Q8NFN8 814 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 USP7Q93009 1102 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 CCDC74AQ96AQ1 378 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 KLHL32Q96NJ5 620 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 CMKLR1Q99788 373 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 C1QTNF7Q9BXJ2 289 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 OSBPL1AQ9BXW6 950 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 CPEB1Q9BZB8 566 aaKnown RBP5.39□□□□□ -1.55
VAPA-207ENST00000583879 EDEM3Q9BZQ6 932 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 TM6SF2Q9BZW4 377 aa5.39□□□□□ -1.55
VAPA-207ENST00000583879 ZYG11BQ9C0D3 744 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms