RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 MBD1Q9UIS9 605 aaPredicted RBP12.49□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 FZD4Q9ULV1 537 aa12.49□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 USP34Q70CQ2 3546 aa12.49□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 A0A087WUV0 522 aaPredicted RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 E7EVH7 732 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PLK4O00444 970 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RGS16O15492 202 aaPredicted RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 MTSS1O43312 755 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 GJB3O75712 270 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PIGNO95427 931 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 HLA-DQB2P05538 268 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RBP3P10745 1247 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ITGB7P26010 798 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 AP1S1P61966 158 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CNTN1Q12860 1018 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ZNF805Q5CZA5 627 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PRR23BQ6ZRT6 265 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RELL1Q8IUW5 271 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CCDC89Q8N998 374 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 HTR3CQ8WXA8 447 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ATG4AQ8WYN0 398 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 KLHL32Q96NJ5 620 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CEP41Q9BYV8 373 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 FOXP3Q9BZS1 431 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RABEP2Q9H5N1 569 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ATP13A3Q9H7F0 1226 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SGK2Q9HBY8 427 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 R3HDM2Q9Y2K5 976 aaKnown RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 NDUFS2O75306 463 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 TCEA3O75764 348 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PTPN3P26045 913 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RBL1P28749 1068 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SERPINA4P29622 427 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ACSL1P33121 698 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 NBL1P41271 181 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SEC24CP53992 1094 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 LMNB2Q03252 620 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 BCL2L1Q07817 233 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CCDC15Q0P6D6 951 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 TEX44Q53QW1 395 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RALGPS1Q5JS13 557 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 FAM182AQ5T1J6 154 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ALG1LQ6GMV1 187 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 DARS2Q6PI48 645 aaKnown RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CEP128Q6ZU80 1094 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ERN2Q76MJ5 926 aaKnown RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 C10orf67Q8IYJ2 551 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CNTD1Q8N815 330 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CCHCR1Q8TD31 782 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 FAM131CQ96AQ9 280 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ZNF641Q96N77 438 aaPredicted RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 AGAP3Q96P47 875 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SEMA3CQ99985 751 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 FERMT1Q9BQL6 677 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 GPR174Q9BXC1 333 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 HDAC8Q9BY41 377 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CDC42EP4Q9H3Q1 356 aaKnown RBP12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SUV39H2Q9H5I1 410 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CCDC134Q9H6E4 229 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 C10orf88Q9H8K7 445 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 MYO15AQ9UKN7 3530 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 DMDP11532 3685 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 C16orf96A6NNT2 1141 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RASGRF2O14827 1237 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SLC7A4O43246 635 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SEMA4FO95754 770 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 CES1P23141 567 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 NEK3P51956 506 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ADPRHP54922 357 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 DSC2Q02487 901 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 NHLH1Q02575 133 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 WASHC5Q12768 1159 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SNX1Q13596 522 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PLK5Q496M5 336 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PIP5KL1Q5T9C9 394 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 AGBL4Q5VU57 503 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 PMS2CLQ68D20 193 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 FBXL19Q6PCT2 694 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 LPCAT2Q7L5N7 544 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 OR14C36Q8NHC7 312 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 ZC3H10Q96K80 434 aaKnown RBP12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 SERPINB12Q96P63 405 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 VAT1Q99536 393 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 DUSP15Q9H1R2 295 aaPredicted RBP12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 RAB23Q9ULC3 237 aa12.47□□□□□ -0.41
CCDC144NL-AS1-216ENST00000582583 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms