RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 NEK3P51956 506 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 NTHL1P78549 312 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 TMPRSS15P98073 1019 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ASPHQ12797 758 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 HTR4Q13639 388 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 CYTH1Q15438 398 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ACCSLQ4AC99 568 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 DENND5AQ6IQ26 1287 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 FSTL4Q6MZW2 842 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 CXorf57Q6NSI4 855 aaKnown RBP9.34□□□□□ -0.91
SS18-220ENST00000582092 LINGO4Q6UY18 593 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 Q6ZNB5 142 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 KIAA0408Q6ZU52 694 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SRLQ86TD4 932 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 PGBD5Q8N414 524 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SLC44A3Q8N4M1 653 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 DCLK2Q8N568 766 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 GPATCH11Q8N954 259 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 DCAF4L2Q8NA75 395 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ARMC2Q8NEN0 867 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 FIBINQ8TAL6 211 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 PPP4R1Q8TF05 950 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 STYXQ8WUJ0 223 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SPOCK2Q92563 424 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ZFRQ96KR1 1074 aaKnown RBP9.34□□□□□ -0.91
SS18-220ENST00000582092 TSSK1BQ9BXA7 367 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 RHOJQ9H4E5 214 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 PDFQ9HBH1 243 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 NOD2Q9HC29 1040 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SNX15Q9NRS6 342 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 HCFC1R1Q9NWW0 138 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 MKS1Q9NXB0 559 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 HACD3Q9P035 362 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SLC17A7Q9P2U7 560 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 PHTF1Q9UMS5 762 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 CHKBQ9Y259 395 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ARL2BPQ9Y2Y0 163 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 NUMBLQ9Y6R0 609 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 MIA3Q5JRA6 1907 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
SS18-220ENST00000582092 A0A096LPK6 155 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 STX7O15400 261 aaKnown RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 SNAP91O60641 907 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 IGSF6O95976 241 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 MMP2P08253 660 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 STMN1P16949 149 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 GLDCP23378 1020 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 AVPR2P30518 371 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 PPARGP37231 505 aaPredicted RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 RECQLP46063 649 aaPredicted RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 CLCN5P51795 746 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 AP1S1P61966 158 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 SNRPD1P62314 119 aaKnown RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 IRX4P78413 519 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 SULT2A1Q06520 285 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 BCL2L1Q07817 233 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 SF3A3Q12874 501 aaKnown RBP eCLIP9.33□□□□□ -0.92
SS18-220ENST00000582092 STX3Q13277 289 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 CTBP1Q13363 440 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 GALNT3Q14435 633 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 TAF1AQ15573 450 aaPredicted RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 DBN1Q16643 649 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 QPCTQ16769 361 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 FASTKD1Q53R41 847 aaKnown RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 ARMC12Q5T9G4 340 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 N4BP2L1Q5TBK1 243 aaPredicted RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 ZNF470Q6ECI4 717 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 KLC3Q6P597 504 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 RGS9BPQ6ZS82 235 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 GLT6D1Q7Z4J2 308 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 PTAR1Q7Z6K3 402 aaPredicted RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 PIGWQ7Z7B1 504 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 TBC1D1Q86TI0 1168 aaPredicted RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 NPAS3Q8IXF0 933 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 TTC8Q8TAM2 541 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 ITFG1Q8TB96 612 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 SHKBP1Q8TBC3 707 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 RAB3IL1Q8TBN0 382 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 ING5Q8WYH8 240 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 PEX13Q92968 403 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 HDAC10Q969S8 669 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.33□□□□□ -0.92
SS18-220ENST00000582092 OTUB2Q96DC9 234 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 ASIC4Q96FT7 647 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 EXOC2Q96KP1 924 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 TTC1Q99614 292 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 BBS2Q9BXC9 721 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 LRRC3Q9BY71 257 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 TRIM55Q9BYV6 548 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 SMG9Q9H0W8 520 aaKnown RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 PLAC1Q9HBJ0 212 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 SLC2A4RGQ9NR83 387 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 PLK2Q9NYY3 685 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 SLC17A6Q9P2U8 582 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 VPS51Q9UID3 782 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms