RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 MATN3O15232 486 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 RAD51BO15315 384 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 PSTPIP1O43586 416 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 SOCS5O75159 536 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 MAP3K6O95382 1288 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 ZFXP17010 805 aaPredicted RBP25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 CR2P20023 1033 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 RABIFP47224 123 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 GBE1Q04446 702 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 BNIP3Q12983 259 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 Q6ZSR6 202 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 PGBD5Q8N414 524 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 TEX26Q8N6G2 289 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 FATE1Q969F0 183 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 BMFQ96LC9 184 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 BAG1Q99933 345 aaPredicted RBP25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 NT5MQ9NPB1 228 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 ALG6Q9Y672 507 aa25.01■■□□□ 1.59
CDC42EP4-205ENST00000580315 TP53BP1Q12888 1972 aaPredicted RBP25■■□□□ 1.59
CDC42EP4-205ENST00000580315 TRAFD1O14545 582 aaPredicted RBP25■■□□□ 1.59
CDC42EP4-205ENST00000580315 APOL1O14791 398 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 NFKBIAP25963 317 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 MMP12P39900 470 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 ABCG1P45844 678 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 ITKQ08881 620 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 TARDBPQ13148 414 aaKnown RBP eCLIP25■■□□□ 1.59
CDC42EP4-205ENST00000580315 C11orf63Q6NUN7 778 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 ZSWIM9Q86XI8 627 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 RFX6Q8HWS3 928 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 CCNYQ8ND76 341 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 MAML1Q92585 1016 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 RNF25Q96BH1 459 aaPredicted RBP25■■□□□ 1.59
CDC42EP4-205ENST00000580315 KLF6Q99612 283 aaPredicted RBP25■■□□□ 1.59
CDC42EP4-205ENST00000580315 POLR1EQ9GZS1 481 aaKnown RBP25■■□□□ 1.59
CDC42EP4-205ENST00000580315 NOD2Q9HC29 1040 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 DTLQ9NZJ0 730 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 AMACRQ9UHK6 382 aa25■■□□□ 1.59
CDC42EP4-205ENST00000580315 TTC24A2A3L6 582 aaPredicted RBP24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 POM121BA6NF01 834 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 C3orf70A6NLC5 250 aaPredicted RBP24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 EIF4E1BA6NMX2 242 aaKnown RBP24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 MAXP61244 160 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 HES3Q5TGS1 186 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 SLC9A4Q6AI14 798 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 PDCD6IPQ8WUM4 868 aaKnown RBP24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 HDAC11Q96DB2 347 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 TFR2Q9UP52 801 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 PCDHGC4Q9Y5F7 938 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 HEY1Q9Y5J3 304 aa24.99■■□□□ 1.59
CDC42EP4-205ENST00000580315 CFAP69A5D8W1 941 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 C6P13671 934 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 CES1P23141 567 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 LIG3P49916 1009 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 SEMG2Q02383 582 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 RAD9BQ6WBX8 426 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 KANSL1Q7Z3B3 1105 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 DAAM2Q86T65 1068 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 CCDC13Q8IYE1 715 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 PLD5Q8N7P1 536 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 SPC24Q8NBT2 197 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 SPOCK2Q92563 424 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 CENPTQ96BT3 561 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 IFT43Q96FT9 208 aa24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 RBM22Q9NW64 420 aaKnown RBP eCLIP24.98■■□□□ 1.59
CDC42EP4-205ENST00000580315 HTRA2O43464 458 aaPredicted RBP24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 LZTS3O60299 673 aaPredicted RBP24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 CPP00450 1065 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 PRKCGP05129 697 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 CCNB1P14635 433 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 ITPKBP27987 946 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 EIF2S3P41091 472 aaKnown RBP24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 NAP1L1P55209 391 aaKnown RBP24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 SLC10A2Q12908 348 aaPredicted RBP24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 SLC22A18ASQ8N1D0 253 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 TXLNBQ8N3L3 684 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 NSMCE3Q96MG7 304 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 SEMA3CQ99985 751 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 NRSN2Q9GZP1 204 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 AK5Q9Y6K8 562 aa24.97■■□□□ 1.59
CDC42EP4-205ENST00000580315 KALRNO60229 2985 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 TOR1BO14657 336 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 TLX3O43711 291 aaPredicted RBP24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 CKMT2P17540 419 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 ILKQ13418 452 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 TFDP2Q14188 446 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 RTP5Q14D33 572 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 LRRC14Q15048 493 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 PDK1Q15118 436 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 MFSD7Q6UXD7 560 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 DPPA4Q7L190 304 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 TPCN2Q8NHX9 752 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 GOLPH3Q9H4A6 298 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 GPR27Q9NS67 375 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 PHTF1Q9UMS5 762 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 COQ6Q9Y2Z9 468 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 TTLL3Q9Y4R7 772 aa24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 HELZ2Q9BYK8 2649 aaKnown RBP24.96■■□□□ 1.59
CDC42EP4-205ENST00000580315 SPTY2D1-AS1A0A0U1RR47 76 aa24.95■■□□□ 1.58
CDC42EP4-205ENST00000580315 BTNL10A8MVZ5 291 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms