RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	MAX	P61244	160 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	YPEL5	P62699	121 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	IL9R	Q01113	521 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	C19orf57	Q0VDD7	668 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RALGDS	Q12967	914 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TFDP2	Q14188	446 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PDK1	Q15118	436 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MFSD7	Q6UXD7	560 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	BZW1	Q7L1Q6	419 aa	Known RBP	13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CCDC13	Q8IYE1	715 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KATNAL2	Q8IYT4	538 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RCOR2	Q8IZ40	523 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SLC22A18AS	Q8N1D0	253 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RNF25	Q96BH1	459 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	OLFM3	Q96PB7	478 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SEMA3C	Q99985	751 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	5e-11	■□□□□ 8.5
CSNK1D-208	ENST00000578501	PHTF1	Q9UMS5	762 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PCDHGC4	Q9Y5F7	938 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TTC24	A2A3L6	582 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GOLGA6L6	A8MZA4	724 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TNFSF14	O43557	240 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PGLS	O95336	258 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ZIC2	O95409	532 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	FTH1P19	P0C7X4	201 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TNNT1	P13805	278 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	IFI35	P80217	286 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PTK2B	Q14289	1009 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	LRRC14	Q15048	493 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	LIPI	Q6XZB0	460 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DPPA4	Q7L190	304 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DAAM2	Q86T65	1068 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GATAD2A	Q86YP4	633 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RFX6	Q8HWS3	928 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TXLNB	Q8N3L3	684 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CCNY	Q8ND76	341 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	LGMN	Q99538	433 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	IL12RB2	Q99665	862 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	LACRT	Q9GZZ8	138 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GOLPH3	Q9H4A6	298 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PPIL1	Q9Y3C6	166 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	HEY1	Q9Y5J3	304 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RAI2	Q9Y5P3	530 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DUSP10	Q9Y6W6	482 aa		13.71	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DSP	P15924	2871 aa	Known RBP	13.71	□□□□□ -0.22
CSNK1D-208	ENST00000578501	WDFY3	Q8IZQ1	3526 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CABIN1	Q9Y6J0	2220 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PPP1R12A	O14974	1030 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	LZTS3	O60299	673 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	FZD6	O60353	706 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	DKK1	O94907	266 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CP	P00450	1065 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CTNNA1	P35221	906 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	IGFALS	P35858	605 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PEX5	P50542	639 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	GSDMD	P57764	484 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ITK	Q08881	620 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TRAF2	Q12933	501 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	BNIP3	Q12983	259 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	FZD2	Q14332	565 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	WSCD2	Q2TBF2	565 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TFDP3	Q5H9I0	405 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ARMC12	Q5T9G4	340 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SPOCD1	Q6ZMY3	1216 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PARG	Q86W56	976 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PAF1	Q8N7H5	531 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SPC24	Q8NBT2	197 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ACRBP	Q8NEB7	543 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	EXD1	Q8NHP7	514 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ARRDC2	Q8TBH0	407 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PIH1D2	Q8WWB5	315 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SCRN2	Q96FV2	425 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	RBM41	Q96IZ5	413 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	BBC3	Q96PG8	261 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	MBNL1	Q9NR56	388 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TOR4A	Q9NXH8	423 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KCTD5	Q9NXV2	234 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	DKK4	Q9UBT3	224 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	COQ6	Q9Y2Z9	468 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PCDHA3	Q9Y5H8	950 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TP53BP1	Q12888	1972 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	DMXL2	Q8TDJ6	3036 aa		13.7	□□□□□ -0.22
CSNK1D-208	ENST00000578501	COL5A1	P20908	1838 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CST8	O60676	142 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PIAS2	O75928	621 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NEBL	O76041	1014 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	JCHAIN	P01591	159 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CSF2	P04141	144 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PRKCG	P05129	697 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	HLA-DQB2	P05538	268 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ELFN1	P0C7U0	828 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CYP2A6	P11509	494 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KRT10	P13645	584 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NME1	P15531	152 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TGM2	P21980	687 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CA4	P22748	312 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	DGKA	P23743	735 aa		13.69	□□□□□ -0.22

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