RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ZFYVE19Q96K21 471 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ZYG11BQ9C0D3 744 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ZNF180Q9UJW8 692 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CDH9Q9ULB4 789 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 TEX264Q9Y6I9 313 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CD3EAPO15446 510 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 IPO13O94829 963 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 CYP4F2P78329 520 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 CYP4F3Q08477 520 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 CSTF3Q12996 717 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PRKG2Q13237 762 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 CARTPTQ16568 116 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 HECTD2Q5U5R9 776 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PATL1Q86TB9 770 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 ELMO1Q92556 727 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 MRPS31Q92665 395 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 ALG2Q9H553 416 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 SIX4Q9UIU6 781 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PRPF19Q9UMS4 504 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 MYOCOSA0A1B0GUC4 107 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 A0A1W2PQH9 124 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 FGFR1P11362 822 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 IVDP26440 423 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 AQP1P29972 269 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 GRK4P32298 578 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PITX1P78337 314 aaPredicted RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 SEMG2Q02383 582 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 CRY1Q16526 586 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 POTEHQ6S545 545 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 TAC4Q86UU9 113 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 STX19Q8N4C7 294 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PTCD3Q96EY7 689 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PANX3Q96QZ0 392 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PIGVQ9NUD9 493 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 STK25O00506 426 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 MLNP12872 115 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 AKR1A1P14550 325 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 GGT5P36269 586 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 HK2P52789 917 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 SIX1Q15475 284 aaPredicted RBP12.08□□□□□ -0.48
ERBB2-206ENST00000578373 LINGO4Q6UY18 593 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 NAT16Q8N8M0 369 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 LINGO1Q96FE5 620 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 TSSK3Q96PN8 268 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 STARD7Q9NQZ5 370 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 GALNT8Q9NY28 637 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 FADS3Q9Y5Q0 445 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 ARFGEF2Q9Y6D5 1785 aa12.08□□□□□ -0.48
ERBB2-206ENST00000578373 SIX3O95343 332 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 CES1P23141 567 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 SLC9A4Q6AI14 798 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 C7orf43Q8WVR3 580 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 OTUB1Q96FW1 271 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 TCF12Q99081 682 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 SH3GL1Q99961 368 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 TRPC4Q9UBN4 977 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 RSL24D1Q9UHA3 163 aaKnown RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PCDHB12Q9Y5F1 795 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 H3BMM5 538 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 TYROBPO43914 113 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 ALOX12P18054 663 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 CDH15P55291 814 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 MADCAM1Q13477 382 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 RETSATQ6NUM9 610 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 RP1L1Q8IWN7 2480 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 OR9I1Q8NGQ6 314 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PCDHGC4Q9Y5F7 938 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 FGF10O15520 208 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 TLR5O60602 858 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 CCDC159P0C7I6 412 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PTPN9P43378 593 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 DEFA1P59665 94 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 DEFA3P59666 94 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 C8orf59Q8N0T1 100 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 ZNF614Q8N883 585 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PNPLA1Q8N8W4 532 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 OR4L1Q8NH43 312 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 REXO4Q9GZR2 422 aaKnown RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 OSGEPL1Q9H4B0 414 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 STN1Q9H668 368 aaKnown RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 COQ10BQ9H8M1 238 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PADI4Q9UM07 663 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 MYH7BA7E2Y1 1941 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 MYH3P11055 1940 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 UBXN8O00124 270 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PDLIM1O00151 329 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 ULK1O75385 1050 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 C22orf31O95567 290 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 LRG1P02750 347 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 EFNA1P20827 205 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PPIL2Q13356 520 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 SPIDRQ14159 915 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms