RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 RBM41Q96IZ5 413 aaKnown RBP12.88□□□□□ -0.35
CCDC57-211ENST00000578187 ZNF641Q96N77 438 aaPredicted RBP12.88□□□□□ -0.35
CCDC57-211ENST00000578187 ZNF830Q96NB3 372 aaPredicted RBP12.88□□□□□ -0.35
CCDC57-211ENST00000578187 OLFM3Q96PB7 478 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 NUDCD1Q96RS6 583 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 AK5Q9Y6K8 562 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 H3BM21 787 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 AREL1O15033 823 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 MATN3O15232 486 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ZRANB2O95218 330 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ACP1P24666 158 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 SERPINA4P29622 427 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 E2F1Q01094 437 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 CAMK2BQ13554 666 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 TFDP2Q14188 446 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 TMEM259Q4ZIN3 620 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 RALGPS1Q5JS13 557 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ALG1LQ6GMV1 187 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 C19orf48Q6RUI8 117 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ZNF662Q6ZS27 426 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 CCDC13Q8IYE1 715 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 SYCE1Q8N0S2 351 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 RNF10Q8N5U6 811 aaKnown RBP12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ECHDC3Q96DC8 303 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 NSMCE3Q96MG7 304 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 DUSP23Q9BVJ7 150 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 MAK16Q9BXY0 300 aaKnown RBP12.87□□□□□ -0.35
CCDC57-211ENST00000578187 SLC17A9Q9BYT1 436 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 SUV39H2Q9H5I1 410 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ATP13A3Q9H7F0 1226 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 FZD3Q9NPG1 666 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 AMACRQ9UHK6 382 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ZFR2Q9UPR6 939 aaKnown RBP12.87□□□□□ -0.35
CCDC57-211ENST00000578187 CA5BQ9Y2D0 317 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 HEY1Q9Y5J3 304 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 HS3ST3A1Q9Y663 406 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 CAPN6Q9Y6Q1 641 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 ZZEF1O43149 2961 aa12.87□□□□□ -0.35
CCDC57-211ENST00000578187 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 TRAFD1O14545 582 aaPredicted RBP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 FPGTO14772 594 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 TSPAN6O43657 245 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 CST8O60676 142 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 SOCS5O75159 536 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 KRT10P13645 584 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 TGM2P21980 687 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 DGKAP23743 735 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 PTPN7P35236 360 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 RABIFP47224 123 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 PEX5P50542 639 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 SCNN1BP51168 640 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 DUSP3P51452 185 aaPredicted RBP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 SUOXP51687 545 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 COPS2P61201 443 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 MAXP61244 160 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 DYNLT1P63172 113 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 IFI35P80217 286 aaPredicted RBP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 BCL2L1Q07817 233 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 ADCY2Q08462 1091 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 TARDBPQ13148 414 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 LRRC69Q6ZNQ3 347 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 Q6ZSR6 202 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 ZSWIM9Q86XI8 627 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 CAMK1DQ8IU85 385 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 OR13H1Q8NG92 308 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 OR4C6Q8NH72 309 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
CCDC57-211ENST00000578187 LGMNQ99538 433 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 NRSN2Q9GZP1 204 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 DNAJC28Q9NX36 388 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 GGT7Q9UJ14 662 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 AMFRQ9UKV5 643 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 CLCA2Q9UQC9 943 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 ITM2BQ9Y287 266 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 DMXL2Q8TDJ6 3036 aa12.86□□□□□ -0.35
CCDC57-211ENST00000578187 IGF2RP11717 2491 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
CCDC57-211ENST00000578187 FFAR2O15552 330 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 RRP8O43159 456 aaKnown RBP12.85□□□□□ -0.35
CCDC57-211ENST00000578187 HTRA2O43464 458 aaPredicted RBP12.85□□□□□ -0.35
CCDC57-211ENST00000578187 SIGLEC6O43699 453 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 KRT86O43790 486 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 CCDC175P0C221 793 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 CCNB1P14635 433 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 TIMP2P16035 220 aa12.85□□□□□ -0.35
CCDC57-211ENST00000578187 NR2C2P49116 596 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms