RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SUV39H2Q9H5I1 410 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RAB6BQ9NRW1 208 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GOLGA6AQ9NYA3 693 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GRHL1Q9NZI5 618 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SCML1Q9UN30 329 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CCDC163A0A0D9SF12 145 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CTIFO43310 598 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SIN3BO75182 1162 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 NEBLO76041 1014 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 HEXIM1O94992 359 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MT-CYBP00156 380 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PRNPP04156 253 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 EPHX1P07099 455 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CTSLP07711 333 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TNFRSF8P28908 595 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CD86P42081 329 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MAGEA3P43357 314 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RECQLP46063 649 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RPL21P46778 160 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 NUMBP49757 651 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SUOXP51687 545 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 COPAP53621 1224 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ZBTB16Q05516 673 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TRIP13Q15645 432 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CRY1Q16526 586 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 C2orf27AQ580R0 203 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ATXN7L2Q5T6C5 722 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TCEAL6Q6IPX3 200 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DENND5AQ6IQ26 1287 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 WDR93Q6P2C0 686 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GDPD4Q6W3E5 623 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DSG4Q86SJ6 1040 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ZNF605Q86T29 641 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 LINC00523Q86TU6 105 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TXNDC5Q8NBS9 432 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 OR2T3Q8NH03 318 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SPATA22Q8NHS9 363 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RPLP0P6Q8NHW5 317 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 OR8D1Q8WZ84 308 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TCEAL3Q969E4 200 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RBM15Q96T37 977 aaKnown RBP eCLIP11.22□□□□□ -0.616e-8■□□□□ 10.7
CDK5RAP3-204ENST00000577664 TRIM51Q9BSJ1 452 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TDRD1Q9BXT4 1180 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FOXP3Q9BZS1 431 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TM6SF2Q9BZW4 377 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PHACTR1Q9C0D0 580 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TNKS2Q9H2K2 1166 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ATP13A3Q9H7F0 1226 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 LRRC40Q9H9A6 602 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FAM114A2Q9NRY5 505 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 IL36AQ9UHA7 158 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 EVLQ9UI08 416 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SHOC2Q9UQ13 582 aa11.22□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ANKRD66B4E2M5 251 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PPFIA2O75334 1257 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GJB3O75712 270 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PGLSO95336 258 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TRIM16O95361 564 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KLF8O95600 359 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 HLA-EP13747 358 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CA4P22748 312 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PSMA3P25788 255 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SERPINA4P29622 427 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DGKEP52429 567 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SEC13P55735 322 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 WNT3AP56704 352 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 POLR2LP62875 67 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SARNPP82979 210 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SLC7A5Q01650 507 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CDK18Q07002 472 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 BCL2L1Q07817 233 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ITKQ08881 620 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CUL1Q13616 776 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ZNF805Q5CZA5 627 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FAM46CQ5VWP2 391 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 NAPEPLDQ6IQ20 393 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KIAA1211LQ6NV74 962 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 LRRC8BQ6P9F7 803 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 BRAT1Q6PJG6 821 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TMEM92Q6UXU6 159 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KBTBD6Q86V97 674 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 IFT20Q8IY31 132 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RAVER1Q8IY67 606 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 STK40Q8N2I9 435 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CHST14Q8NCH0 376 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 LSM14AQ8ND56 463 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PIH1D2Q8WWB5 315 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 UBXN4Q92575 508 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 EXOC2Q96KP1 924 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 LYSMD1Q96S90 227 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 HDAC8Q9BY41 377 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 EPB41L5Q9HCM4 733 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CASS4Q9NQ75 786 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ZDHHC18Q9NUE0 388 aa11.21□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ASIC3Q9UHC3 531 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms