RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 STRADAQ7RTN6 431 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 FAM26EQ8N5C1 309 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 AGBL5Q8NDL9 886 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 JPH3Q8WXH2 748 aaPredicted RBP13.43□□□□□ -0.26
COPS3-214ENST00000577246 OR1E3Q8WZA6 343 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 NKD1Q969G9 470 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 TUBGCP5Q96RT8 1024 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 DPYSL5Q9BPU6 564 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 EFHD1Q9BUP0 239 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 DDA1Q9BW61 102 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 WDR26Q9H7D7 661 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 RDH14Q9HBH5 336 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 FGF22Q9HCT0 170 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 METTL5Q9NRN9 209 aaKnown RBP13.43□□□□□ -0.26
COPS3-214ENST00000577246 ATP8A1Q9Y2Q0 1164 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 KIF26BQ2KJY2 2108 aa13.43□□□□□ -0.26
COPS3-214ENST00000577246 AHCTF1Q8WYP5 2266 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 TMEM202A6NGA9 273 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 PIGNO95427 931 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 ELFN1P0C7U0 828 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 CCL4P13236 92 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 EPHB2P29323 1055 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 ALDH4A1P30038 563 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 CSTF2P33240 577 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPS3-214ENST00000577246 MAN1A1P33908 653 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 PTPN9P43378 593 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 GPR3P46089 330 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 RAB15P59190 212 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 ILF3Q12906 894 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPS3-214ENST00000577246 NR1D2Q14995 579 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 NCAPHQ15003 741 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 SKIDA1Q1XH10 827 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 TAF3Q5VWG9 929 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 TMPRSS9Q7Z410 1059 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 ZNF438Q7Z4V0 828 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 CACNA2D3Q8IZS8 1091 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 EMC1Q8N766 993 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 PAF1Q8N7H5 531 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 RTL3Q8N8U3 475 aaKnown RBP13.42□□□□□ -0.26
COPS3-214ENST00000577246 C9orf43Q8TAL5 461 aaPredicted RBP13.42□□□□□ -0.26
COPS3-214ENST00000577246 NTAN1Q96AB6 310 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 FUBP1Q96AE4 644 aaKnown RBP13.42□□□□□ -0.26
COPS3-214ENST00000577246 KIAA1143Q96AT1 154 aaPredicted RBP13.42□□□□□ -0.26
COPS3-214ENST00000577246 GSDMCQ9BYG8 508 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 TMEM168Q9H0V1 697 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 ATP13A3Q9H7F0 1226 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 CYP4F12Q9HCS2 524 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
COPS3-214ENST00000577246 MOSPD1Q9UJG1 213 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 AJAP1Q9UKB5 411 aaPredicted RBP13.42□□□□□ -0.26
COPS3-214ENST00000577246 NEU3Q9UQ49 428 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 BSNQ9UPA5 3926 aa13.42□□□□□ -0.26
COPS3-214ENST00000577246 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
COPS3-214ENST00000577246 IGHV5-10-1A0A0J9YXX1 117 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 PRSS38A1L453 326 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 FAM72CH0Y354 149 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 RECQL5O94762 991 aaPredicted RBP13.41□□□□□ -0.26
COPS3-214ENST00000577246 CCNB1P14635 433 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 LIFP15018 202 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 SERPINA4P29622 427 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 UGT1A3P35503 534 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 OR1D5P58170 312 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 POLR2LP62875 67 aaKnown RBP13.41□□□□□ -0.26
COPS3-214ENST00000577246 NOMO3P69849 1222 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 SEPT6Q14141 434 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 MAN2A1Q16706 1144 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
COPS3-214ENST00000577246 C15orf59Q2T9L4 293 aaPredicted RBP13.41□□□□□ -0.26
COPS3-214ENST00000577246 CCDC14Q49A88 953 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 C2CD6Q53TS8 623 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 DCAF12Q5T6F0 453 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 FAM72AQ5TYM5 149 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 NAA35Q5VZE5 725 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 FAM72DQ6L9T8 149 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 FAM72BQ86X60 149 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 ZNF677Q86XU0 584 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 FAM114A1Q8IWE2 563 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 RCBTB1Q8NDN9 531 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 OR4D9Q8NGE8 314 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 ZDHHC1Q8WTX9 485 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 RXFP2Q8WXD0 754 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 CPA5Q8WXQ8 436 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 EXOC2Q96KP1 924 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 CCDC74BQ96LY2 380 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 TEFMQ96QE5 360 aaKnown RBP13.41□□□□□ -0.26
COPS3-214ENST00000577246 CATSPERBQ9H7T0 1116 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 MRPL40Q9NQ50 206 aaKnown RBP13.41□□□□□ -0.26
COPS3-214ENST00000577246 KCTD5Q9NXV2 234 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 LHX3Q9UBR4 397 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
COPS3-214ENST00000577246 CLEC18AA5D8T8 446 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 RASA4BC9J798 803 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 INSIG1O15503 277 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 RASA4O43374 803 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 B4GAT1O43505 415 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 FGF3P11487 239 aaPredicted RBP13.4□□□□□ -0.26
COPS3-214ENST00000577246 TRIM23P36406 574 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 NOP2P46087 812 aaKnown RBP13.4□□□□□ -0.26
COPS3-214ENST00000577246 LIMK2P53671 638 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms