RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ATP13A3Q9H7F0 1226 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 IL21RQ9HBE5 538 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 SGK2Q9HBY8 427 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 TM9SF3Q9HD45 589 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 DYRK4Q9NR20 520 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 GDF3Q9NR23 364 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 MBNL1Q9NR56 388 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 PIH1D1Q9NWS0 290 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 KLHL8Q9P2G9 620 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 DMGDHQ9UI17 866 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 RAB23Q9ULC3 237 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 NCKAP1Q9Y2A7 1128 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 FARP1Q9Y4F1 1045 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 PCDHB9Q9Y5E1 797 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 CACNA1EQ15878 2313 aa7.96□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF106Q9H2Y7 1883 aaKnown RBP7.96□□□□□ -1.14
CCDC40-215ENST00000576033 CXorf51AA0A1B0GTR3 108 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 A0A1B0GVT2 93 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 K7ESM1 405 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 AREL1O15033 823 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 SCAMP1O15126 338 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 HTRA2O43464 458 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 LIASO43766 372 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 FZD6O60353 706 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 USP12O75317 370 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PMPCBO75439 489 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PGLSO95336 258 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 METTL18O95568 372 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 FGGP02679 453 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 RETP07949 1114 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 C1SP09871 688 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 C6P13671 934 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 KCNA4P22459 653 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 MCM3P25205 808 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 OXTRP30559 389 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 IGFALSP35858 605 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 MAPK8P45983 427 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 KCNJ1P48048 391 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 CSNK1EP49674 416 aaKnown RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 COPS2P61201 443 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 AP1S1P61966 158 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 IRX4P78413 519 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 GRIK2Q13002 908 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 SPARCL1Q14515 664 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 E2F5Q15329 346 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 TCEA2Q15560 299 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 CNGA3Q16281 694 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 UGP2Q16851 508 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 TRIM61Q5EBN2 209 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PEAR1Q5VY43 1037 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 TTC27Q6P3X3 843 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 DARS2Q6PI48 645 aaKnown RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 CCNI2Q6ZMN8 369 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 GCNT7Q6ZNI0 430 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 TTC7BQ86TV6 843 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PLPP6Q8IY26 295 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 SLC22A18ASQ8N1D0 253 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 FAM71DQ8N9W8 422 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 SLC35B2Q8TB61 432 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 AENQ8WTP8 325 aaKnown RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 NSMCE1Q8WV22 266 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PIH1D2Q8WWB5 315 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 TADA1Q96BN2 335 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 IMP4Q96G21 291 aaKnown RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PPP1R16AQ96I34 528 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 TEKT5Q96M29 485 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 NAP1L3Q99457 506 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 AP1M1Q9BXS5 423 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 OSBPL1AQ9BXW6 950 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 FUT8Q9BYC5 575 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 CPEB1Q9BZB8 566 aaKnown RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 GLOD4Q9HC38 313 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 ARFGAP3Q9NP61 516 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 SEMA4GQ9NTN9 838 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 DONSONQ9NYP3 566 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 B4GALT6Q9UBX8 382 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 CD84Q9UIB8 345 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 GMEB2Q9UKD1 530 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PNMA8BQ9ULN7 279 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-215ENST00000576033 SPO11Q9Y5K1 396 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 PLXNB3Q9ULL4 1909 aa7.95□□□□□ -1.14
CCDC40-215ENST00000576033 A0A1W2PPC4 97 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 POM121BA6NF01 834 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 LRRC72A6NJI9 287 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 NEMP1O14524 444 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 AURKAO14965 403 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 GPR39O43194 453 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SLC7A4O43246 635 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 RAD51CO43502 376 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 LATO43561 262 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SASH3O75995 380 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 NEBLO76041 1014 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 TJP3O95049 919 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PAK4O96013 591 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PCCBP05166 539 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 ATXN1LP0C7T5 689 aaKnown RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 MYBL2P10244 700 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms