RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SYCP2LQ5T4T6 812 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 KCTD11Q693B1 232 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 TBC1D3GQ6DHY5 549 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 TBC1D3CQ6IPX1 549 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 C4orf22Q6V702 233 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 SLC36A4Q6YBV0 504 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 TBC1D3Q8IZP1 549 aaPredicted RBP8.61□□□□□ -1.03
NUP88-211ENST00000575976 SLC25A41Q8N5S1 370 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
NUP88-211ENST00000575976 OR2T34Q8NGX1 318 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 SLCO2A1Q92959 643 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 RAB7BQ96AH8 199 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 RMDN1Q96DB5 314 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 SCRN2Q96FV2 425 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 FEM1CQ96JP0 617 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 RUNDC3BQ96NL0 473 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 PPP1R2P1Q96PQ5 205 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 APOL2Q9BQE5 337 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 B4GALT6Q9UBX8 382 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 PPIL1Q9Y3C6 166 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 PCDHGA2Q9Y5H1 932 aa8.61□□□□□ -1.03
NUP88-211ENST00000575976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 A0A0U1RQS6 177 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 TCRBV7S3A2A0A539 114 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 GOLGA6CA6NDK9 693 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 GOLGA6BA6NDN3 693 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 NPIPB15A6NHN6 443 aaPredicted RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 LRRC72A6NJI9 287 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 METTL12A8MUP2 240 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 ANKRD66B4E2M5 251 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 C10orf142B7Z368 130 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 E7EVH7 732 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 NEMP1O14524 444 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 MMP20O60882 483 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 RNGTTO60942 597 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 PCDH8O95206 1070 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 AP2A1O95782 977 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 LMNAP02545 664 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 APRTP07741 180 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 GOLGA6DP0CG33 693 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 HNF1BP35680 557 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 GRIA4P48058 902 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 LMAN1P49257 510 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 SUOXP51687 545 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 RPL26P61254 145 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 PPP2CBP62714 309 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 PPP2CAP67775 309 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 BASP1P80723 227 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 DR1Q01658 176 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 RPL6Q02878 288 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 ELP6Q0PNE2 266 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 PTK6Q13882 451 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 DHX34Q14147 1143 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 SLC1A5Q15758 541 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 PLK5Q496M5 336 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 TMEM52BQ4KMG9 183 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 SIRPB2Q5JXA9 342 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 KIAA0895LQ68EN5 471 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 CCDC70Q6NSX1 233 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 ERAP2Q6P179 960 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 RANBP10Q6VN20 620 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 SYDE1Q6ZW31 735 aaPredicted RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 USP45Q70EL2 814 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 CEP68Q76N32 757 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 DPPA4Q7L190 304 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 JAMLQ86YT9 394 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 SLC41A1Q8IVJ1 513 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 TMEFF1Q8IYR6 380 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 KLK6Q92876 244 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 MCCC1Q96RQ3 725 aaPredicted RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 TBL1YQ9BQ87 522 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 TRIM51Q9BSJ1 452 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 WRAP53Q9BUR4 548 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 CARD6Q9BX69 1037 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 FSD1LQ9BXM9 530 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 ADGRE3Q9BY15 652 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 DUSP15Q9H1R2 295 aaPredicted RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 C6orf106Q9H6K1 298 aaPredicted RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 LRRC40Q9H9A6 602 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 PREBQ9HCU5 417 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 GOLGA6AQ9NYA3 693 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 RPL26L1Q9UNX3 145 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 ZFR2Q9UPR6 939 aaKnown RBP8.6□□□□□ -1.03
NUP88-211ENST00000575976 VPS13AQ96RL7 3174 aa8.6□□□□□ -1.03
NUP88-211ENST00000575976 DNAH14Q0VDD8 3507 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 EML5Q05BV3 1969 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 ANKRD36A6QL64 1941 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 A0A1W2PQU0 124 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CTAGE15A4D2H0 777 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 FAM187AA6NFU0 413 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 IGLON5A6NGN9 336 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CAPN8A6NHC0 703 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 RAD51CO43502 376 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 TSPAN6O43657 245 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 SUN1O94901 812 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 FSBPO95073 299 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms