RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KLC2Q9H0B6 622 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 ERVMER34-1Q9H9K5 563 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 ZFYVE1Q9HBF4 777 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 ZFR2Q9UPR6 939 aaKnown RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 APOBEC2Q9Y235 224 aaKnown RBP7.54□□□□□ -1.2
NUP88-205ENST00000572809 BTBD3Q9Y2F9 522 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.54□□□□□ -1.29e-7■□□□□ 10.1
NUP88-205ENST00000572809 FADS3Q9Y5Q0 445 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 HS3ST3A1Q9Y663 406 aa7.54□□□□□ -1.2
NUP88-205ENST00000572809 PLXNA2O75051 1894 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 A0A087X0T9 212 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 FAM221BA6H8Z2 402 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 ARHGAP42A6NI28 874 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 TNFSF14O43557 240 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 TSPAN6O43657 245 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 AP1G1O43747 822 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 LRCH4O75427 683 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 TMCC1O94876 653 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 GYPCP04921 128 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 ITGAVP06756 1048 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 FAM228BP0C875 321 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 ERCC2P18074 760 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 NFKB1P19838 968 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 CD33P20138 364 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 AKT2P31751 481 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 PCK1P35558 622 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 RXRGP48443 463 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 ARRB1P49407 418 aaPredicted RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 PAPOLAP51003 745 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 ZNF135P52742 658 aaPredicted RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 PCBP4P57723 403 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 NXPH1P58417 271 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 RHOAP61586 193 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 RPS21P63220 83 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 SGCGQ13326 291 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 PIGHQ14442 188 aaPredicted RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 SHBQ15464 509 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 PCSK7Q16549 785 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 ZNF284Q2VY69 593 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 BOLA3Q53S33 107 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 PPP6R3Q5H9R7 873 aaPredicted RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 CCDC122Q5T0U0 273 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 ATXN7L2Q5T6C5 722 aaPredicted RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 ALKBH5Q6P6C2 394 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 GDPD4Q6W3E5 623 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 RFX8Q6ZV50 586 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 RAB44Q7Z6P3 723 aaPredicted RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 SPATS2Q86XZ4 545 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 GATAD2AQ86YP4 633 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 OXR1Q8N573 874 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 TMEM145Q8NBT3 493 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 NETO2Q8NC67 525 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 OR6K2Q8NGY2 324 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 BAHD1Q8TBE0 780 aaPredicted RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 SAP25Q8TEE9 199 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 ADAMTS14Q8WXS8 1223 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 RAB7BQ96AH8 199 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 GDAP1L1Q96MZ0 367 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 PEBP4Q96S96 227 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 OSBPL1AQ9BXW6 950 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 SLC17A9Q9BYT1 436 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 CPEB1Q9BZB8 566 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 XPO4Q9C0E2 1151 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 SLC39A8Q9C0K1 460 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 THAP2Q9H0W7 228 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 LRRC19Q9H756 370 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 CWC15Q9P013 229 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 CA5BQ9Y2D0 317 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 MFHAS1Q9Y4C4 1052 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 NEUROG3Q9Y4Z2 214 aa7.53□□□□□ -1.2
NUP88-205ENST00000572809 NYNRINQ9P2P1 1898 aaKnown RBP7.53□□□□□ -1.2
NUP88-205ENST00000572809 KNL1Q8NG31 2342 aa7.52□□□□□ -1.2
NUP88-205ENST00000572809 TMEM131Q92545 1883 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 IGLON5A6NGN9 336 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 J3KR12 359 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 NEMP1O14524 444 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 YKT6O15498 198 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 CBFA2T2O43439 604 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 PRAMEF11O60813 436 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 LDOC1O95751 146 aaPredicted RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 IGSF6O95976 241 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 CYP1A2P05177 515 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 UGT2B4P06133 528 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 ATXN1LP0C7T5 689 aaKnown RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 C1QTNF9P0C862 333 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 THEGLP0DJG4 465 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 PRLRP16471 622 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 HNRNPA2B1P22626 353 aaKnown RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 IL1R2P27930 398 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 ST13P50502 369 aaKnown RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 GRM3Q14832 879 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 ST3GAL2Q16842 350 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 INAVAQ3KP66 663 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 SEL1L3Q68CR1 1132 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 KIAA1161Q6NSJ0 714 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 CYP4V2Q6ZWL3 525 aaPredicted RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 PARS2Q7L3T8 475 aaKnown RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 ZSCAN30Q86W11 494 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms