RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 MAP3K6O95382 1288 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 TPM3P06753 285 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 GP1BAP07359 652 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 H2AFZP0C0S5 128 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 XPAP23025 273 aaPredicted RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 GARSP41250 739 aaKnown RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 MMP13P45452 471 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 PEX5P50542 639 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 RENBPP51606 427 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 THOP1P52888 689 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 GBE1Q04446 702 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 TARDBPQ13148 414 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH3-209ENST00000569080 MTM1Q13496 603 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 KRT81Q14533 505 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 ZNF235Q14590 738 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 NFATC4Q14934 902 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 LRRC14Q15048 493 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 CNGA3Q16281 694 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 ALG11Q2TAA5 492 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 ANKRD20A8PQ5CZ79 823 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 ZCCHC8Q6NZY4 707 aaKnown RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 ERAP2Q6P179 960 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 GUSBP11Q6P575 273 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 SARM1Q6SZW1 724 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 LIPIQ6XZB0 460 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 H2AFVQ71UI9 128 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 CBARPQ8N350 705 aaPredicted RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 PDCD7Q8N8D1 485 aaKnown RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 CTNNBL1Q8WYA6 563 aaPredicted RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 FATE1Q969F0 183 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 PDXPQ96GD0 296 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 COQ10AQ96MF6 247 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 MCCC1Q96RQ3 725 aaPredicted RBP7.86□□□□□ -1.15
CDH3-209ENST00000569080 DUSP23Q9BVJ7 150 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 USP29Q9HBJ7 922 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 SPTLC3Q9NUV7 552 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 CTTNBP2NLQ9P2B4 639 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 GPSM3Q9Y4H4 160 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 OR1A2Q9Y585 309 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 PCDHGC4Q9Y5F7 938 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 ADAMTS20P59510 1910 aa7.86□□□□□ -1.15
CDH3-209ENST00000569080 ATMQ13315 3056 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 MGAQ8IWI9 3026 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 EME2A4GXA9 379 aaPredicted RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 NEMP2A6NFY4 417 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 NPIPB15A6NHN6 443 aaPredicted RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 ZNF487B1APH4 448 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 CASC3O15234 703 aaKnown RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 HEXIM1O94992 359 aaKnown RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 PGLSO95336 258 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 CPP00450 1065 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PCCBP05166 539 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 ELFN1P0C7U0 828 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 ALPPL2P10696 532 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 TSHRP16473 764 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 HNF1BP35680 557 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 GJC1P36383 396 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 TRIM23P36406 574 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 HK3P52790 923 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PDX1P52945 283 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 ADKP55263 362 aaKnown RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 KIAA1024LP59773 190 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 DAB2P98082 770 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 CYP4F3Q08477 520 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 SLC10A2Q12908 348 aaPredicted RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 PTK2BQ14289 1009 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 INPP5AQ14642 412 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 RTP5Q14D33 572 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PDK2Q15119 407 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 TCEAL1Q15170 157 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PTPRRQ15256 657 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 HADHQ16836 314 aaKnown RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 DEFB133Q30KQ1 61 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PRRT3Q5FWE3 981 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 RALGPS1Q5JS13 557 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 C6orf132Q5T0Z8 1188 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 CFAP58Q5T655 872 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 MARC1Q5VT66 337 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 ESRP1Q6NXG1 681 aaKnown RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 LRRC49Q8IUZ0 686 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 SLC35F3Q8IY50 421 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PLD5Q8N7P1 536 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 LMX1AQ8TE12 382 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 BTN2A2Q8WVV5 523 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PIH1D2Q8WWB5 315 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 OR1E3Q8WZA6 343 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 RAPGEF5Q92565 580 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 HDAC11Q96DB2 347 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 NXPE2Q96DL1 559 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 TSGA13Q96PP4 275 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 SMIM14Q96QK8 99 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 NHEJ1Q9H9Q4 299 aaPredicted RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 FGF22Q9HCT0 170 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 SCUBE2Q9NQ36 999 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 DTLQ9NZJ0 730 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 SPASTQ9UBP0 616 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 LCMT1Q9UIC8 334 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms