RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 B4E171 279 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 BHMG1C9JSJ3 638 aaPredicted RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 HSF2BPO75031 334 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 ECEL1O95672 775 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 FGF1P05230 155 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 MYL1P05976 194 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 GLI1P08151 1106 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 KRT5P13647 590 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 PFKFB1P16118 471 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 GRNP28799 593 aaKnown RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 TSPAN7P41732 249 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 FMO5P49326 533 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 CXCR3P49682 368 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 MC1RQ01726 317 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 ABHD18Q0P651 414 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 MTA1Q13330 715 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 TRA2AQ13595 282 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLK3-222ENST00000568232 ERV3-1Q14264 604 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 NADK2Q4G0N4 442 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 TMEM52BQ4KMG9 183 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 EFHC1Q5JVL4 640 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 FAM183BPQ6ZVS7 135 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 C17orf82Q86X59 251 aaPredicted RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 OR4D9Q8NGE8 314 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 ATL2Q8NHH9 583 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 LMO3Q8TAP4 145 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 PDCD6IPQ8WUM4 868 aaKnown RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 ZNF606Q8WXB4 792 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 CCDC47Q96A33 483 aaKnown RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 KREMEN1Q96MU8 473 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 EFHD1Q9BUP0 239 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 OSBPL1AQ9BXW6 950 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 INTS2Q9H0H0 1204 aaKnown RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 SUDS3Q9H7L9 328 aaPredicted RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 CYP4F12Q9HCS2 524 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 APMAPQ9HDC9 416 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 DONSONQ9NYP3 566 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 MOSPD1Q9UJG1 213 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 ERRFI1Q9UJM3 462 aaPredicted RBP11.83□□□□□ -0.52
CLK3-222ENST00000568232 PCDHGA10Q9Y5H3 936 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 PDZD2O15018 2839 aa11.83□□□□□ -0.52
CLK3-222ENST00000568232 MED13Q9UHV7 2174 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 A8MU76 341 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 PPM1DO15297 605 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 DNAJB5O75953 348 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 STK17BO94768 372 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 GSRP00390 522 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 COPB1P53618 953 aaKnown RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 RAB15P59190 212 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 SNRPD1P62314 119 aaKnown RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 NR1D2Q14995 579 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 POLD3Q15054 466 aaPredicted RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 CRTC2Q53ET0 693 aaPredicted RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 PRR30Q53SZ7 412 aaPredicted RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 SNAP47Q5SQN1 464 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 ANKRD40Q6AI12 368 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 ZNF783Q6ZMS7 281 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 NRROSQ86YC3 692 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 ZDHHC1Q8WTX9 485 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 ARHGEF2Q92974 986 aaKnown RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 LGR4Q9BXB1 951 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 NDFIP2Q9NV92 336 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 ASNSD1Q9NWL6 643 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 ARMCX3Q9UH62 379 aaPredicted RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 SETD2Q9BYW2 2564 aaPredicted RBP11.82□□□□□ -0.52
CLK3-222ENST00000568232 APCP25054 2843 aa11.82□□□□□ -0.52
CLK3-222ENST00000568232 AKAP9Q99996 3911 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 IGHV1OR21-1A0A087WYE8 117 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 SLC16A3O15427 465 aaKnown RBP11.81□□□□□ -0.52
CLK3-222ENST00000568232 THAP12O43422 761 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 MED7O43513 233 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 DAB1O75553 588 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 RFPL1O75677 317 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 LDLRP01130 860 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 PRF1P14222 555 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 BMP6P22004 513 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 STAT5AP42229 794 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 LIG3P49916 1009 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 PMS1P54277 932 aaKnown RBP11.81□□□□□ -0.52
CLK3-222ENST00000568232 MTM1Q13496 603 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 CLPPQ16740 277 aaPredicted RBP11.81□□□□□ -0.52
CLK3-222ENST00000568232 BRMS1LQ5PSV4 323 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 OLFML1Q6UWY5 402 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 PASD1Q8IV76 773 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 HMCESQ96FZ2 354 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 C1orf74Q96LT6 269 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 TEFMQ96QE5 360 aaKnown RBP11.81□□□□□ -0.52
CLK3-222ENST00000568232 NPY6RQ99463 290 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
CLK3-222ENST00000568232 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 CHD5Q8TDI0 1954 aa11.81□□□□□ -0.52
CLK3-222ENST00000568232 CACNB4O00305 520 aaPredicted RBP11.8□□□□□ -0.52
CLK3-222ENST00000568232 INSIG1O15503 277 aa11.8□□□□□ -0.52
CLK3-222ENST00000568232 PIGNO95427 931 aa11.8□□□□□ -0.52
CLK3-222ENST00000568232 FUCA1P04066 466 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms