RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 PAK4O96013 591 aaPredicted RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 CPP00450 1065 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 TRBC1P01850 177 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CFIP05156 583 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 HNRNPA2B1P22626 353 aaKnown RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 LHCGRP22888 699 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CD38P28907 300 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CD86P42081 329 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CSNK1EP49674 416 aaKnown RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 SEMG2Q02383 582 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 ITKQ08881 620 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 PTPRRQ15256 657 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CDKN3Q16667 212 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 KIF19Q2TAC6 998 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 ARMC12Q5T9G4 340 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 KDELC1Q6UW63 502 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 IQCHQ86VS3 1027 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CDKL3Q8IVW4 592 aaPredicted RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 SLC35F6Q8N357 371 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 MFSD2AQ8NA29 543 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 TP53I13Q8NBR0 393 aaPredicted RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 SPATA22Q8NHS9 363 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 OXNAD1Q96HP4 312 aaPredicted RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 FCRL5Q96RD9 977 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 EDEM2Q9BV94 578 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 NUSAP1Q9BXS6 441 aaKnown RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 ZDHHC5Q9C0B5 715 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 FZD3Q9NPG1 666 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 HAUS2Q9NVX0 235 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 TRMT1Q9NXH9 659 aaKnown RBP12.47□□□□□ -0.41
RNF40-211ENST00000567365 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 TRHDEQ9UKU6 1024 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 DNPEPQ9ULA0 475 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CHKBQ9Y259 395 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 CA5BQ9Y2D0 317 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 ANKRD6Q9Y2G4 727 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 HS3ST3A1Q9Y663 406 aa12.47□□□□□ -0.41
RNF40-211ENST00000567365 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 POM121BA6NF01 834 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 C5orf60A6NFR6 353 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 NPIPB15A6NHN6 443 aaPredicted RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 H7C0C1 242 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 TM7SF2O76062 418 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 HEXIM1O94992 359 aaKnown RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 MT-CYBP00156 380 aaPredicted RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 SYPP08247 313 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 C6P13671 934 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 NFKB1P19838 968 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 VIPR1P32241 457 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 ATP5OP48047 213 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 LIG3P49916 1009 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 ARHGAP8P85298 464 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 OVGP1Q12889 678 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 CNGA3Q16281 694 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 QPCTQ16769 361 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 ZNF423Q2M1K9 1284 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 CFAP58Q5T655 872 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 SEL1L2Q5TEA6 688 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 STPG1Q5TH74 334 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 CCDC181Q5TID7 509 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 ERAP2Q6P179 960 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 KYAT3Q6YP21 454 aaKnown RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 SPATS2Q86XZ4 545 aaKnown RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 C12orf50Q8NA57 414 aaPredicted RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 PDCD6IPQ8WUM4 868 aaKnown RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 RTP4Q96DX8 246 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 COQ10AQ96MF6 247 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 SPATA13Q96N96 652 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 RBM15Q96T37 977 aaKnown RBP eCLIP12.46□□□□□ -0.41
RNF40-211ENST00000567365 WRAP53Q9BUR4 548 aaKnown RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 FRMD8P1Q9BZ68 369 aaPredicted RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 GBA3Q9H227 469 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 PCDH9Q9HC56 1237 aa12.46□□□□□ -0.41
RNF40-211ENST00000567365 DNAAF2Q9NVR5 837 aaKnown RBP12.46□□□□□ -0.41
RNF40-211ENST00000567365 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
RNF40-211ENST00000567365 LOC285095A0A1B0GVY8 99 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 ANKRD66B4E2M5 251 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 H0Y8X5 98 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 TLR4O00206 839 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 NEMP1O14524 444 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 ENC1O14682 589 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 SLC30A4O14863 429 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 FANCGO15287 622 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 LIASO43766 372 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 ZNF189O75820 626 aaPredicted RBP12.45□□□□□ -0.42
RNF40-211ENST00000567365 EPOP01588 193 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 ATP1A1P05023 1023 aaKnown RBP12.45□□□□□ -0.42
RNF40-211ENST00000567365 XPAP23025 273 aaPredicted RBP12.45□□□□□ -0.42
RNF40-211ENST00000567365 AKT2P31751 481 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 HNF1BP35680 557 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 IGFALSP35858 605 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 NXPH1P58417 271 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 PFN3P60673 137 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 FAM193AP78312 1265 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 TEAD4Q15561 434 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 WSCD2Q2TBF2 565 aa12.45□□□□□ -0.42
RNF40-211ENST00000567365 AASDHQ4L235 1098 aaPredicted RBP12.45□□□□□ -0.42
RNF40-211ENST00000567365 ZNF569Q5MCW4 686 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms