RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PRKCSHP14314 528 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 NFKBIAP25963 317 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 EEF1GP26641 437 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 IGFALSP35858 605 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 PSMC2P35998 433 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 PEX5P50542 639 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 CCL11P51671 97 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 SRP54P61011 504 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 KRT83P78385 493 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 MC2RQ01718 297 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 ALG11Q2TAA5 492 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 DCAF17Q5H9S7 520 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 RABGAP1LQ5R372 815 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 TTC39BQ5VTQ0 682 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 PAPD7Q5XG87 772 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 SPECC1LQ69YQ0 1117 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 ENPP7Q6UWV6 458 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 CCAR2Q8N163 923 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 ANKRD20A12PQ8NF67 263 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 OR2A12Q8NGT7 310 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 SPATA3Q8NHX4 192 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 NDRG1Q92597 394 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 RAB7BQ96AH8 199 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 MYEOVQ96EZ4 313 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 SERPINB11Q96P15 392 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 TWNKQ96RR1 684 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 RBM15Q96T37 977 aaKnown RBP eCLIP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 CTRCQ99895 268 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 TRIM55Q9BYV6 548 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 TRIM5Q9C035 493 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 XPO4Q9C0E2 1151 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 CYP3A43Q9HB55 503 aa9.79□□□□□ -0.84
CAPN3-216ENST00000567071 ARMCX3Q9UH62 379 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 LIMA1Q9UHB6 759 aaKnown RBP9.79□□□□□ -0.84
CAPN3-216ENST00000567071 COL6A5A8TX70 2615 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 YJEFN3A6XGL0 299 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 E7ENQ6 273 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 GRID2O43424 1007 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 PRICKLE3O43900 615 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-216ENST00000567071 LEFTY1O75610 366 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 CREG1O75629 220 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 DLGAP3O95886 979 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 TRIM49P0CI25 452 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 TRIM49CP0CI26 452 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 KRT13P13646 458 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 CD58P19256 250 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 F8A1P23610 371 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 L1CAMP32004 1257 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 ASPAP45381 313 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 GPR3P46089 330 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 ADIGQ0VDE8 80 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 MAN2A1Q16706 1144 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 TCERG1LQ5VWI1 586 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 SARM1Q6SZW1 724 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 BHLHA9Q7RTU4 235 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 APTXQ7Z2E3 356 aaKnown RBP9.78□□□□□ -0.84
CAPN3-216ENST00000567071 TMEM135Q86UB9 458 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 SLC47A2Q86VL8 602 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 TRIM59Q8IWR1 403 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 CISD2Q8N5K1 135 aaKnown RBP9.78□□□□□ -0.84
CAPN3-216ENST00000567071 THAP4Q8WY91 577 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 CENPTQ96BT3 561 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 TUBGCP2Q9BSJ2 902 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 MMRN2Q9H8L6 949 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 MLXIPLQ9NP71 852 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 FBXO8Q9NRD0 319 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 AGPAT4Q9NRZ5 378 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 ATRQ13535 2644 aa9.78□□□□□ -0.84
CAPN3-216ENST00000567071 A0A1B0GUH1 482 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 XPO1O14980 1071 aaKnown RBP9.77□□□□□ -0.85
CAPN3-216ENST00000567071 POLR1CO15160 346 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-216ENST00000567071 VNN1O95497 513 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 ADCY5O95622 1261 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 TPM2P07951 284 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 SRCP12931 536 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 TACR2P21452 398 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 MPSTP25325 297 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 CD1CP29017 333 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 PIK3CAP42336 1068 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 ZNF75DP51815 510 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 ART1P52961 327 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
CAPN3-216ENST00000567071 UBASH3AP57075 661 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 FILIP1LQ4L180 1135 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 RAP1GAP2Q684P5 730 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 C6orf15Q6UXA7 325 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-216ENST00000567071 LINGO4Q6UY18 593 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 BMPERQ8N8U9 685 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 ANKRD52Q8NB46 1076 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 CHST14Q8NCH0 376 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 ST6GALNAC3Q8NDV1 305 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 PLEKHO2Q8TD55 490 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 TMEM174Q8WUU8 243 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 STAMBPL1Q96FJ0 436 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 NAP1L5Q96NT1 182 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-216ENST00000567071 RANBP9Q96S59 729 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 FEM1AQ9BSK4 669 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 C2orf49Q9BVC5 232 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-216ENST00000567071 TMUB1Q9BVT8 246 aa9.77□□□□□ -0.85
CAPN3-216ENST00000567071 ULBP3Q9BZM4 244 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms