RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 RDH11Q8TC12 318 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 PTCD2Q8WV60 388 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 SREK1Q8WXA9 508 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 CLPTM1LQ96KA5 538 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 MRGPRX2Q96LB1 330 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 APOL5Q9BWW9 433 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 GATA5Q9BWX5 397 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 ACE2Q9BYF1 805 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 TASP1Q9H6P5 420 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 MRM3Q9HC36 420 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 NT5MQ9NPB1 228 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 STX18Q9P2W9 335 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 TCAF1Q9Y4C2 921 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 PRRC2BQ5JSZ5 2229 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 TRANK1O15050 2925 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 PHGDHO43175 533 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 CLASP2O75122 1294 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 TBX10O75333 385 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 PMPCBO75439 489 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 SAT1P21673 171 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 POLD2P49005 469 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 SLC34A1Q06495 639 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 CTBP1Q13363 440 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 SLC12A1Q13621 1099 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 TEAD2Q15562 447 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 PCSK7Q16549 785 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 UGP2Q16851 508 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 IL31Q6EBC2 164 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 ZYG11AQ6WRX3 759 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 DENND6AQ8IWF6 608 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 GPR65Q8IYL9 337 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 PPHLN1Q8NEY8 458 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 RIN3Q8TB24 985 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 GDPD5Q8WTR4 605 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 NRG4Q8WWG1 115 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 ING5Q8WYH8 240 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 PLD4Q96BZ4 506 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 MYCBPQ99417 103 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 SP110Q9HB58 689 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 TREX1Q9NSU2 369 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 CFAP97Q9P2B7 532 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 SLC2A6Q9UGQ3 507 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 SLC7A8Q9UHI5 535 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 BPTFQ12830 3046 aa10.88□□□□□ -0.67
PDXDC1-214ENST00000566633 A0A088AWK7 358 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 EPOPA6NHQ4 379 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 TARM1B6A8C7 271 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 C5orf67F2Z3F1 127 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 RHOP08100 348 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 COL6A2P12110 1019 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 PPP3CCP48454 512 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 MXRA7P84157 204 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 IHHQ14623 411 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CCDC6Q16204 474 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CNGA3Q16281 694 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CMPK2Q5EBM0 449 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 GPR158Q5T848 1215 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 MFSD6LQ8IWD5 586 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 BBS7Q8IWZ6 715 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CENPLQ8N0S6 344 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CARNMT1Q8N4J0 409 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 SHKBP1Q8TBC3 707 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 STMN2Q93045 179 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 PANX3Q96QZ0 392 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 NKX2-4Q9H2Z4 354 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CXorf56Q9H5V9 222 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 MID2Q9UJV3 735 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CLEC4EQ9ULY5 219 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 RUVBL2Q9Y230 463 aaKnown RBP10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 ASB3Q9Y575 518 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 NYNRINQ9P2P1 1898 aaKnown RBP10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 H3BNC9 293 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 TK2O00142 265 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 TBL1XO60907 577 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 NCF2P19878 526 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 VHLP40337 213 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 NDST2P52849 883 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 SESN3P58005 492 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 ACTR3P61158 418 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 MPP1Q00013 466 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 SLC25A3Q00325 362 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 TRMT5Q32P41 509 aaKnown RBP10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 SLC9B1Q4ZJI4 515 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 MARC1Q5VT66 337 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 LIPMQ5VYY2 423 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 TMC5Q6UXY8 1006 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 SLC41A1Q8IVJ1 513 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 CEP97Q8IW35 865 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 POU5F2Q8N7G0 328 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 GPATCH11Q8N954 259 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 TDRD5Q8NAT2 981 aaKnown RBP10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 WFDC5Q8TCV5 224 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 MAPK15Q8TD08 544 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 STYXQ8WUJ0 223 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 KCTD4Q8WVF5 259 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 MOCOSQ96EN8 888 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 EXOC2Q96KP1 924 aa10.87□□□□□ -0.67
PDXDC1-214ENST00000566633 ZSWIM3Q96MP5 696 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms