RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 GABPB2Q8TAK5 448 aaPredicted RBP18.79■□□□□ 0.6
MSLN-207ENST00000566549 SLC26A7Q8TE54 656 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 ANKRD27Q96NW4 1050 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 SMIM14Q96QK8 99 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.79■□□□□ 0.6
MSLN-207ENST00000566549 DNMT3LQ9UJW3 386 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 ACSL4O60488 711 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 TSPAN3O60637 253 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 DNAJB1P25685 340 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 RGRP47804 291 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 SGSHP51688 502 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 SEMA3AQ14563 771 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 PIWIL4Q7Z3Z4 852 aaKnown RBP18.79■□□□□ 0.6
MSLN-207ENST00000566549 MAB21L3Q8N8X9 362 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 PPFIBP2Q8ND30 876 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 PDFQ9HBH1 243 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 ANGPTL2Q9UKU9 493 aa18.79■□□□□ 0.6
MSLN-207ENST00000566549 DOCK4Q8N1I0 1966 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 CCDC162PA2VCL2 907 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 CCNT2O60583 730 aaKnown RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 HOXD9P28356 352 aaPredicted RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 PPARGP37231 505 aaPredicted RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 KCNC1P48547 511 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 SCNN1BP51168 640 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 ATN1P54259 1190 aaPredicted RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 GNA12Q03113 381 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 ELAVL2Q12926 359 aaKnown RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 DEFB115Q30KQ5 88 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 TSPAN17Q96FV3 270 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 NSMCE3Q96MG7 304 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 MYCBPQ99417 103 aaPredicted RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 NDE1Q9NXR1 346 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 VTI1BQ9UEU0 232 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 PHF24Q9UPV7 400 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 FNDC1Q4ZHG4 1894 aaPredicted RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 NPHS1O60500 1241 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 IPO13O94829 963 aaKnown RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 GLP2RO95838 553 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 SERPINF2P08697 491 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 ACADSP16219 412 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 PFKPQ01813 784 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 PLCD3Q8N3E9 789 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 TTC16Q8NEE8 873 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 PRICKLE1Q96MT3 831 aaPredicted RBP18.78■□□□□ 0.6
MSLN-207ENST00000566549 RTKNQ9BST9 563 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 PPP1R12CQ9BZL4 782 aa18.78■□□□□ 0.6
MSLN-207ENST00000566549 MAP3K7O43318 606 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 COCHO43405 550 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 PRDX6P30041 224 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 GCKP35557 465 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 SULT2A1Q06520 285 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 CCNIQ14094 377 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 PGM2L1Q6PCE3 622 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 C16orf59Q7L2K0 433 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 PDCD6IPQ8WUM4 868 aaKnown RBP18.77■□□□□ 0.6
MSLN-207ENST00000566549 RCN3Q96D15 328 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 UBXN10Q96LJ8 280 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 CINPQ9BW66 212 aaPredicted RBP18.77■□□□□ 0.6
MSLN-207ENST00000566549 POMPQ9Y244 141 aa18.77■□□□□ 0.6
MSLN-207ENST00000566549 MIA3Q5JRA6 1907 aa18.77■□□□□ 0.59
MSLN-207ENST00000566549 SLCO1B7G3V0H7 640 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 CD3EAPO15446 510 aaKnown RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 CFLARO15519 480 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 LUC7L3O95232 432 aaKnown RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 MT-CO1P00395 513 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 FGF1P05230 155 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 THRAP10827 490 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 HLA-DPA1P20036 260 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 TNK2Q07912 1038 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 CYLC2Q14093 348 aaPredicted RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 ANO7Q6IWH7 933 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 ZNF549Q6P9A3 640 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 FBXW8Q8N3Y1 598 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 RMDN1Q96DB5 314 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 FEM1CQ96JP0 617 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 FNDC3AQ9Y2H6 1198 aaKnown RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 COPG1Q9Y678 874 aaKnown RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 RGSL1A5PLK6 1076 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 SEC24AO95486 1093 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 KLKB1P03952 638 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 SLC11A2P49281 568 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 ALDH7A1P49419 539 aaKnown RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 KPNA1P52294 538 aaPredicted RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 DNAJB13P59910 316 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 LRRC36Q1X8D7 754 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 KIAA1841Q6NSI8 718 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 CUZD1Q86UP6 607 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 MICAL1Q8TDZ2 1067 aa18.76■□□□□ 0.59
MSLN-207ENST00000566549 MRPL9Q9BYD2 267 aaKnown RBP18.76■□□□□ 0.59
MSLN-207ENST00000566549 ZNF840PA6NDX5 716 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 CBX4O00257 560 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 SDHDO14521 159 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 RBP1P09455 135 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 CORO1AP31146 461 aaKnown RBP18.75■□□□□ 0.59
MSLN-207ENST00000566549 MSX2P35548 267 aaPredicted RBP18.75■□□□□ 0.59
MSLN-207ENST00000566549 HK2P52789 917 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 OXCT1P55809 520 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 BTKQ06187 659 aa18.75■□□□□ 0.59
MSLN-207ENST00000566549 SMARCB1Q12824 385 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms