RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 TRIM31Q9BZY9 425 aa15.59■□□□□ 0.09
CDH11-209ENST00000564317 C6orf106Q9H6K1 298 aaPredicted RBP15.59■□□□□ 0.09
CDH11-209ENST00000564317 SGK2Q9HBY8 427 aa15.59■□□□□ 0.09
CDH11-209ENST00000564317 PIH1D1Q9NWS0 290 aaKnown RBP15.59■□□□□ 0.09
CDH11-209ENST00000564317 GOLGA6AQ9NYA3 693 aa15.59■□□□□ 0.09
CDH11-209ENST00000564317 PRR23AA6NEV1 266 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 FAM47DPA6NHR8 397 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 ERI2A8K979 691 aaKnown RBP15.58■□□□□ 0.08
CDH11-209ENST00000564317 DNALI1O14645 258 aaPredicted RBP15.58■□□□□ 0.08
CDH11-209ENST00000564317 RPP40O75818 363 aaKnown RBP15.58■□□□□ 0.08
CDH11-209ENST00000564317 FGF1P05230 155 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 VIPR1P32241 457 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 RPL21P46778 160 aaKnown RBP15.58■□□□□ 0.08
CDH11-209ENST00000564317 SUOXP51687 545 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 CCDC15Q0P6D6 951 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 TCF15Q12870 199 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 MSLNQ13421 630 aaPredicted RBP15.58■□□□□ 0.08
CDH11-209ENST00000564317 CDKN3Q16667 212 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 TMEM52BQ4KMG9 183 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 RNASEH2BQ5TBB1 312 aaKnown RBP15.58■□□□□ 0.08
CDH11-209ENST00000564317 IZUMO3Q5VZ72 239 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 C8orf74Q6P047 294 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 ERAP2Q6P179 960 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 USP45Q70EL2 814 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 ZNF534Q76KX8 674 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 MAATS1Q7Z4T9 603 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 NAT8LQ8N9F0 302 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 ZBTB44Q8NCP5 570 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 OR52K1Q8NGK4 314 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 OR2T34Q8NGX1 318 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 GAB3Q8WWW8 586 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 LRRC45Q96CN5 670 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 SCRN2Q96FV2 425 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 WRAP53Q9BUR4 548 aaKnown RBP15.58■□□□□ 0.08
CDH11-209ENST00000564317 GPR174Q9BXC1 333 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 PREBQ9HCU5 417 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 SNX24Q9Y343 169 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 PLXND1Q9Y4D7 1925 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 NUMA1Q14980 2115 aa15.58■□□□□ 0.08
CDH11-209ENST00000564317 EFCAB8A8MWE9 144 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 RNGTTO60942 597 aaKnown RBP15.57■□□□□ 0.08
CDH11-209ENST00000564317 LILRB5O75023 590 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 SLC7A5Q01650 507 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 ELP6Q0PNE2 266 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 CNGA3Q16281 694 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 SEL1L3Q68CR1 1132 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 NAPEPLDQ6IQ20 393 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 CRTC1Q6UUV9 634 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 DEFB119Q8N690 84 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 LYSMD1Q96S90 227 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 HINFPQ9BQA5 517 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 ERP44Q9BS26 406 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 DPH5Q9H2P9 285 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 ARNT2Q9HBZ2 717 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 CASS4Q9NQ75 786 aa15.57■□□□□ 0.08
CDH11-209ENST00000564317 RRAGDQ9NQL2 400 aaPredicted RBP15.57■□□□□ 0.08
CDH11-209ENST00000564317 TPX2Q9ULW0 747 aaKnown RBP15.57■□□□□ 0.08
CDH11-209ENST00000564317 ZFR2Q9UPR6 939 aaKnown RBP15.57■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3DA0A087WVF3 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3IA0A087WXS9 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3EA0A087X179 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3KA0A087X1G2 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 A0A1W2PQU0 124 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3FA6NER0 549 aaPredicted RBP15.56■□□□□ 0.08
CDH11-209ENST00000564317 LRRC72A6NJI9 287 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3LB9A6J9 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 H0Y858 1186 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 NEMP1O14524 444 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 AURKAO14965 403 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TP73O15350 636 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TSPAN6O43657 245 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 MMP20O60882 483 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 SEC31AO94979 1220 aaKnown RBP15.56■□□□□ 0.08
CDH11-209ENST00000564317 HEXIM1O94992 359 aaKnown RBP15.56■□□□□ 0.08
CDH11-209ENST00000564317 PCDH8O95206 1070 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 C1SP09871 688 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3HP0C7X1 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 CYP2A6P11509 494 aaPredicted RBP15.56■□□□□ 0.08
CDH11-209ENST00000564317 TPH1P17752 444 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 GM2AP17900 193 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TNNT3P45378 269 aaPredicted RBP15.56■□□□□ 0.08
CDH11-209ENST00000564317 RPL6Q02878 288 aaKnown RBP15.56■□□□□ 0.08
CDH11-209ENST00000564317 FGL2Q14314 439 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TRADDQ15628 312 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 LRRC66Q68CR7 880 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 KIAA0895LQ68EN5 471 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 DUPD1Q68J44 220 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3GQ6DHY5 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3CQ6IPX1 549 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 CCDC70Q6NSX1 233 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 LIPIQ6XZB0 460 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 PPP1R21Q6ZMI0 780 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 LYSMD3Q7Z3D4 306 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 LINC00523Q86TU6 105 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 PPIL6Q8IXY8 311 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 TBC1D3Q8IZP1 549 aaPredicted RBP15.56■□□□□ 0.08
CDH11-209ENST00000564317 NDUFAF2Q8N183 169 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 CXorf40AQ8TE69 158 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 KDM4CQ9H3R0 1056 aa15.56■□□□□ 0.08
CDH11-209ENST00000564317 SHOC2Q9UQ13 582 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms