RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CCDC77Q9BR77 488 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 ROPN1BQ9BZX4 212 aaPredicted RBP10.21□□□□□ -0.77
SMG1-208ENST00000563448 ROPN1Q9HAT0 212 aaPredicted RBP10.21□□□□□ -0.77
SMG1-208ENST00000563448 TMBIM4Q9HC24 238 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 FAM53CQ9NYF3 392 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMG1-208ENST00000563448 RPL26L1Q9UNX3 145 aaKnown RBP10.21□□□□□ -0.77
SMG1-208ENST00000563448 ARL5AQ9Y689 179 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 STON1Q9Y6Q2 735 aa10.21□□□□□ -0.77
SMG1-208ENST00000563448 A0A0U1RQS6 177 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 TLDC2A0PJX2 215 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 FAM159BA6NKW6 160 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 SMIM23A6NLE4 172 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 RASGRF2O14827 1237 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 EPHX1P07099 455 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 TIE1P35590 1138 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 WASP42768 502 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 SLCO1A2P46721 670 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 PFKPQ01813 784 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 TAF1AQ15573 450 aaPredicted RBP10.21□□□□□ -0.78
SMG1-208ENST00000563448 SMAD1Q15797 465 aaKnown RBP10.21□□□□□ -0.78
SMG1-208ENST00000563448 CNGA3Q16281 694 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 KLHL38Q2WGJ6 581 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 KRT71Q3SY84 523 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 SLC44A4Q53GD3 710 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 ADHFE1Q8IWW8 467 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 OR13J1Q8NGT2 312 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 ARL8AQ96BM9 186 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 CERS2Q96G23 380 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 CYTH2Q99418 400 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 PRSS16Q9NQE7 514 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 EURLQ9NYK6 297 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 CTNNAL1Q9UBT7 734 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 SUN2Q9UH99 717 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 SARDHQ9UL12 918 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 PHTF1Q9UMS5 762 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 PPIL1Q9Y3C6 166 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 PRUNE2Q8WUY3 3088 aa10.21□□□□□ -0.78
SMG1-208ENST00000563448 TSPAN11A1L157 253 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 BUD23O43709 281 aaKnown RBP10.2□□□□□ -0.78
SMG1-208ENST00000563448 OPA1O60313 960 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 PAPSS2O95340 614 aaPredicted RBP10.2□□□□□ -0.78
SMG1-208ENST00000563448 CRTAMO95727 393 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 ERVK-10P10266 1014 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 GLULP15104 373 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 DRD1P21728 446 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 ARNTP27540 789 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 HNF1BP35680 557 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 ARCN1P48444 511 aaKnown RBP10.2□□□□□ -0.78
SMG1-208ENST00000563448 CDKN3Q16667 212 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 NLRP9Q7RTR0 991 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 GLT6D1Q7Z4J2 308 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 KCNMB4Q86W47 210 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 TTC30BQ8N4P2 665 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 PAF1Q8N7H5 531 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 OR13C4Q8NGS5 318 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 OR8D1Q8WZ84 308 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 SPOCK2Q92563 424 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 ERLEC1Q96DZ1 483 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 MRRFQ96E11 262 aaKnown RBP10.2□□□□□ -0.78
SMG1-208ENST00000563448 PAFAH2Q99487 392 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 DHRS4Q9BTZ2 278 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 OSBPL1AQ9BXW6 950 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 MAGEE1Q9HCI5 957 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 VPS18Q9P253 973 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 SLC17A6Q9P2U8 582 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 FETUBQ9UGM5 382 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 DUSP12Q9UNI6 340 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 ZNF711Q9Y462 761 aa10.2□□□□□ -0.78
SMG1-208ENST00000563448 A0A1W2PQ67 120 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 CAPN8A6NHC0 703 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 H3BQF6 201 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 CCL22O00626 93 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 NPC1O15118 1278 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 UGT1A9O60656 530 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 IVLP07476 585 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ZNF140P52738 457 aaPredicted RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 TMPRSS15P98073 1019 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ACVR1Q04771 509 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ZP2Q05996 745 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 MGAT5Q09328 741 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 GRSF1Q12849 480 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMG1-208ENST00000563448 LAMB3Q13751 1172 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ELAVL3Q14576 367 aaKnown RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 C2orf27AQ580R0 203 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 TTMPQ5BVD1 217 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ZNF805Q5CZA5 627 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 KIAA0930Q6ICG6 404 aaPredicted RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 ZNF449Q6P9G9 518 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ADGRD1Q6QNK2 874 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 CTAGE3PQ8IX95 158 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 CHPFQ8IZ52 775 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PPM1NQ8N819 430 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 TMIEQ8NEW7 156 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PIP4K2CQ8TBX8 421 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 HCAR2Q8TDS4 363 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 STYXQ8WUJ0 223 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 DCAKDQ8WVC6 231 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 EID2BQ96D98 161 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 SCRN2Q96FV2 425 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms