RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 ZNF805Q5CZA5 627 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 DNAJC21Q5F1R6 531 aaKnown RBP14.84□□□□□ -0.03
CDH11-207ENST00000563255 BRAT1Q6PJG6 821 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 TSSK4Q6SA08 328 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 KDELC2Q7Z4H8 507 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 GSPT2Q8IYD1 628 aaKnown RBP14.84□□□□□ -0.03
CDH11-207ENST00000563255 NDUFAF2Q8N183 169 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 TXNDC5Q8NBS9 432 aaKnown RBP14.84□□□□□ -0.03
CDH11-207ENST00000563255 RPLP0P6Q8NHW5 317 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
CDH11-207ENST00000563255 PIH1D2Q8WWB5 315 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 CAVIN3Q969G5 261 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 CLDN23Q96B33 292 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 SIGLEC10Q96LC7 697 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 KLHL32Q96NJ5 620 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 IL22Q9GZX6 179 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 RSPH9Q9H1X1 276 aaPredicted RBP14.84□□□□□ -0.03
CDH11-207ENST00000563255 LMAN1LQ9HAT1 526 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 DKK3Q9UBP4 350 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 MMP17Q9ULZ9 603 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 PCDHB9Q9Y5E1 797 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 PCDHGA2Q9Y5H1 932 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 TEX264Q9Y6I9 313 aa14.84□□□□□ -0.03
CDH11-207ENST00000563255 CACNA1BQ00975 2339 aa14.83□□□□□ -0.03
CDH11-207ENST00000563255 MAGEB16A2A368 324 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 C1QTNF3-AMACRE9PGA6 284 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 AVILO75366 819 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 HOXB2P14652 356 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 CHRNA4P43681 627 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 PDIA2Q13087 525 aaKnown RBP14.83□□□□□ -0.04
CDH11-207ENST00000563255 GALNT3Q14435 633 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 QPCTQ16769 361 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 FAM46CQ5VWP2 391 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 CCNJLQ8IV13 435 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 SLC25A41Q8N5S1 370 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 OR2T3Q8NH03 318 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 PIP4K2CQ8TBX8 421 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 GRIN3AQ8TCU5 1115 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 CNTNAP3BQ96NU0 1288 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 RANBP9Q96S59 729 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 SRPK1Q96SB4 655 aaKnown RBP14.83□□□□□ -0.04
CDH11-207ENST00000563255 CNTNAP3Q9BZ76 1288 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 TXLNGYQ9BZA5 131 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 CD248Q9HCU0 757 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 ARGLU1Q9NWB6 273 aaPredicted RBP14.83□□□□□ -0.04
CDH11-207ENST00000563255 ZSCAN32Q9NX65 697 aa14.83□□□□□ -0.04
CDH11-207ENST00000563255 A0A0J9YYE9 177 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 A0A1W2PQF6 199 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 RNASEH1O60930 286 aaKnown RBP14.82□□□□□ -0.04
CDH11-207ENST00000563255 ATG13O75143 517 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 CPP00450 1065 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 TRBC1P01850 177 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 H2AFXP16104 143 aaPredicted RBP14.82□□□□□ -0.04
CDH11-207ENST00000563255 ADRA1DP25100 572 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 NFKBIAP25963 317 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 ITGB7P26010 798 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 MGAT1P26572 445 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 MAGEA4P43358 317 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 RPS9P46781 194 aaKnown RBP14.82□□□□□ -0.04
CDH11-207ENST00000563255 COPAP53621 1224 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 EPHB1P54762 984 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 SESN2P58004 480 aaPredicted RBP14.82□□□□□ -0.04
CDH11-207ENST00000563255 MTAPQ13126 283 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 LAMB3Q13751 1172 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 RSPO4Q2I0M5 234 aaPredicted RBP14.82□□□□□ -0.04
CDH11-207ENST00000563255 BBS9Q3SYG4 887 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 CCDC38Q502W7 563 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 CFAP58Q5T655 872 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 TMC3Q7Z5M5 1100 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 CCDC25Q86WR0 208 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 AGGF1Q8N302 714 aaeCLIP14.82□□□□□ -0.04
CDH11-207ENST00000563255 LPCAT1Q8NF37 534 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 BRSK1Q8TDC3 778 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 PTCD2Q8WV60 388 aaKnown RBP14.82□□□□□ -0.04
CDH11-207ENST00000563255 PPP1R16AQ96I34 528 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 EBNA1BP2Q99848 306 aaKnown RBP14.82□□□□□ -0.04
CDH11-207ENST00000563255 NAT9Q9BTE0 207 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 MAGEE1Q9HCI5 957 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 SAYSD1Q9NPB0 183 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 HACD3Q9P035 362 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 SARDHQ9UL12 918 aa14.82□□□□□ -0.04
CDH11-207ENST00000563255 SPTBN2O15020 2390 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 PLXNA2O75051 1894 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 ADH1BP00325 375 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 IL1BP01584 269 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 TSHRP16473 764 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 TPH1P17752 444 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 SLC8A1P32418 973 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 ELK3P41970 407 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 SUOXP51687 545 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 SATB1Q01826 763 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 UGP2Q16851 508 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 PCID2Q5JVF3 399 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 SPDYCQ5MJ68 293 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 CERCAMQ5T4B2 595 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 KIAA1211LQ6NV74 962 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 SYT13Q7L8C5 426 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 ZSWIM9Q86XI8 627 aa14.81□□□□□ -0.04
CDH11-207ENST00000563255 MMAAQ8IVH4 418 aaKnown RBP14.81□□□□□ -0.04
CDH11-207ENST00000563255 ZBED8Q8IZ13 594 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms