RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 EFNB1P98172 346 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 TROAPQ12815 778 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 ZBTB17Q13105 803 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 PPFIA1Q13136 1202 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 TAF11Q15544 211 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 OTUD3Q5T2D3 398 aaPredicted RBP4.13□□□□□ -1.75
NAE1-211ENST00000563253 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 FAM122CQ6P4D5 195 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 B3GNT6Q6ZMB0 384 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 NOXA1Q86UR1 476 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 TMTC1Q8IUR5 882 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 CPOQ8IVL8 374 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 LMNTD1Q8N9Z9 388 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 SCCPDHQ8NBX0 429 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 SPATA22Q8NHS9 363 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 CD101Q93033 1021 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 SIN3AQ96ST3 1273 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 TTYH1Q9H313 450 aaPredicted RBP4.13□□□□□ -1.75
NAE1-211ENST00000563253 RIC8AQ9NPQ8 531 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 DDX4Q9NQI0 724 aaKnown RBP4.13□□□□□ -1.75
NAE1-211ENST00000563253 HSF4Q9ULV5 492 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 VDAC3Q9Y277 283 aa4.13□□□□□ -1.75
NAE1-211ENST00000563253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.13□□□□□ -1.75
NAE1-211ENST00000563253 TEX22C9J3V5 150 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 MID1O15344 667 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 PLRG1O43660 514 aaKnown RBP4.12□□□□□ -1.75
NAE1-211ENST00000563253 LMX1BO60663 402 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 GUCY1B2O75343 617 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 RFPL2O75678 378 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 GAS8-AS1O95177 125 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 HEXAP06865 529 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 SP1P08047 785 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 SRCP12931 536 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 ETFAP13804 333 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 TCEA1P23193 301 aaKnown RBP4.12□□□□□ -1.75
NAE1-211ENST00000563253 POU1F1P28069 291 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 PSMC2P35998 433 aaKnown RBP4.12□□□□□ -1.75
NAE1-211ENST00000563253 PGM1P36871 562 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 GRIK3Q13003 919 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 TDGQ13569 410 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 VEPH1Q14D04 833 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 KRTAP27-1Q3LI81 207 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 MMEL1Q495T6 779 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 FOXL2NBQ6ZUU3 175 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 TMPRSS12Q86WS5 348 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 DCUN1D3Q8IWE4 304 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 C11orf65Q8NCR3 313 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 AGBL3Q8NEM8 1001 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 NOC3LQ8WTT2 800 aaKnown RBP4.12□□□□□ -1.75
NAE1-211ENST00000563253 FIG4Q92562 907 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 FBXL8Q96CD0 374 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 FEM1CQ96JP0 617 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 C17orf75Q9HAS0 396 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 C1RLQ9NZP8 487 aa4.12□□□□□ -1.75
NAE1-211ENST00000563253 ERRFI1Q9UJM3 462 aaPredicted RBP4.12□□□□□ -1.75
NAE1-211ENST00000563253 A0A0G2JPF8 293 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 HNRNPCL3B7ZW38 293 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 BCAT2O15382 392 aaPredicted RBP4.11□□□□□ -1.75
NAE1-211ENST00000563253 XPNPEP2O43895 674 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 HNRNPCL1O60812 293 aaKnown RBP4.11□□□□□ -1.75
NAE1-211ENST00000563253 URODP06132 367 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 GALTP07902 379 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 HNRNPCL4P0DMR1 293 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 AGAP20933 346 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 ZNF132P52740 706 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 EFNA5P52803 228 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.11□□□□□ -1.75
NAE1-211ENST00000563253 NFIL3Q16649 462 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 ZNF766Q5HY98 468 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 STPG1Q5TH74 334 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 WDR73Q6P4I2 378 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 TMEM81Q6P7N7 255 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 CCNI2Q6ZMN8 369 aaPredicted RBP4.11□□□□□ -1.75
NAE1-211ENST00000563253 LRRC8DQ7L1W4 858 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 LRRTM4Q86VH4 590 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 SFR1Q86XK3 245 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 MAB21L3Q8N8X9 362 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 LNX1Q8TBB1 728 aaPredicted RBP4.11□□□□□ -1.75
NAE1-211ENST00000563253 TMEM19Q96HH6 336 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 BBS4Q96RK4 519 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 EPYCQ99645 322 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 KXD1Q9BQD3 176 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 HAUS8Q9BT25 410 aa4.11□□□□□ -1.75
NAE1-211ENST00000563253 INTS2Q9H0H0 1204 aaKnown RBP4.11□□□□□ -1.75
NAE1-211ENST00000563253 BEX4Q9NWD9 120 aaPredicted RBP4.11□□□□□ -1.75
NAE1-211ENST00000563253 CNOT7Q9UIV1 285 aaKnown RBP4.11□□□□□ -1.75
NAE1-211ENST00000563253 EIF3FO00303 357 aaPredicted RBP4.1□□□□□ -1.75
NAE1-211ENST00000563253 IFRD1O00458 451 aaPredicted RBP4.1□□□□□ -1.75
NAE1-211ENST00000563253 SOCS5O75159 536 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 TACC1O75410 805 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 MT-CYBP00156 380 aaPredicted RBP4.1□□□□□ -1.75
NAE1-211ENST00000563253 MMP2P08253 660 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 CDH15P55291 814 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 ANKRD54Q6NXT1 300 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 SLC22A25Q6T423 547 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 MTSS1LQ765P7 747 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 SATL1Q86VE3 508 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 ANKRD18AQ8IVF6 992 aa4.1□□□□□ -1.75
NAE1-211ENST00000563253 FOXP4Q8IVH2 680 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms