RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 MCMBPQ9BTE3 642 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 VIPP01282 170 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 GRIA3P42263 894 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 SF1Q15637 639 aaKnown RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 OR4L1Q8NH43 312 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 ALKBH4Q9NXW9 302 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 DEC1Q9P2X7 70 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 MORF4L1Q9UBU8 362 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 A0A087WXM4 84 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 LIN7AO14910 233 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 CBX6O95503 412 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 BRCC3P46736 316 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 MASP1P48740 699 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 CXCR3P49682 368 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 TNK2Q07912 1038 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 GRB14Q14449 540 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 SAPCD2Q86UD0 394 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 C17orf64Q86WR6 236 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 HPS6Q86YV9 775 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 SMG7Q92540 1137 aaKnown RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 DLG3Q92796 817 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 MYDGFQ969H8 173 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 RNF157Q96PX1 679 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
RPAP1-204ENST00000562303 NECTIN3Q9NQS3 549 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 OGDHLQ9ULD0 1010 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 PSMD13Q9UNM6 376 aa11.29□□□□□ -0.6
RPAP1-204ENST00000562303 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 TRBV23OR9-2A0A075B6M9 112 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 STX16-NPEPL1H3BU86 382 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 STX16O14662 325 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 TCEA3O75764 348 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CBFBQ13951 182 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 GRM3Q14832 879 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ARHGAP36Q6ZRI8 547 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CXXC5Q7LFL8 322 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CAB39LQ9H9S4 337 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ERGIC3Q9Y282 383 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CPS1P31327 1500 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CHD1O14646 1710 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 TIPRLO75663 272 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 OR5F1O95221 314 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ADRB2P07550 413 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 MANFP55145 182 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CAPSQ13938 189 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ZIK1Q3SY52 487 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ESRP1Q6NXG1 681 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 SPESP1Q6UW49 350 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 UBE2R2Q712K3 238 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 DAW1Q8N136 415 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 RP9Q8TA86 221 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 HEXDCQ8WVB3 486 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ITCHQ96J02 903 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 MRPL57Q9BQC6 102 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 AARSD1Q9BTE6 412 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 C1orf50Q9BV19 199 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 PRDM12Q9H4Q4 367 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 DDX18Q9NVP1 670 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 GPC6Q9Y625 555 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 TNFRSF21O75509 655 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 RNASEH2AO75792 299 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 MRPS5P82675 430 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ST3GAL1Q11201 340 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 NDUFA9Q16795 377 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ATAT1Q5SQI0 421 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CFAP52Q8N1V2 620 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ALLCQ8N6M5 410 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 OR52K2Q8NGK3 314 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 FRMD6Q96NE9 622 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CNGB3Q9NQW8 809 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 FAM105AQ9NUU6 356 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 MBD2Q9UBB5 411 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 HECAQ9UBI9 543 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 SPHKAPQ2M3C7 1700 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 RASGRP1O95267 797 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 IFNGP01579 166 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CYP4F2P78329 520 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 ZNF844Q08AG5 666 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 DUSP4Q13115 394 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CDH24Q86UP0 819 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CAMK1DQ8IU85 385 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 SPATA6LQ8N4H0 392 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 BRINP2Q9C0B6 783 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 EPB41L1Q9H4G0 881 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 CRNNQ9UBG3 495 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-204ENST00000562303 BTBD3Q9Y2F9 522 aa11.28□□□□□ -0.6
RPAP1-204ENST00000562303 NRXN1Q9ULB1 1477 aa11.27□□□□□ -0.6
RPAP1-204ENST00000562303 PSMD11O00231 422 aa11.27□□□□□ -0.6
RPAP1-204ENST00000562303 PRODHO43272 600 aa11.27□□□□□ -0.6
RPAP1-204ENST00000562303 CHRNGP07510 517 aa11.27□□□□□ -0.6
RPAP1-204ENST00000562303 LINC00032P0C843 101 aa11.27□□□□□ -0.6
RPAP1-204ENST00000562303 FLT3LGP49771 235 aa11.27□□□□□ -0.6
RPAP1-204ENST00000562303 ARHGDIBP52566 201 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms